| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4246 |
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| Symbol | |
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| ID | 8728005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5122235 |
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| End bp | 5124616 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003389029 |
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| Protein GI | 284039099 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGT TTCGTTTTCT TTTCTTTATC GTCCTGTTCC CGGTAAGCAC GTTTGCCCAA
ACTCCCACCC CCCCCGACTG GACTAACCAG TACTGGCCCG CCCGCTGGAT TCTACATCCT
ACGTCCCCGG CCCGTCAGTA TGGCATCTAT CACGTTCGAA AAGCCATTGA GCTGGCGCAG
AAACCCGCCC GGTTTGTGGT GCACGTGTCG GCCGACAACC GCTACCGGCT TTTTGTCAAT
GGCAAAGCCG TAGCCATGGG CCCCGCCCGC AGCGACACCC AGAACTGGAA TTACGAAACT
CTCGATCTGG CACCGTATTT ACAGGCAGGT CGTAATGTGC TGGCCGCGCA GGTCTGGTAC
ATGGGAGAGG GAGCGCCCTT TGCCCAGATG AGTTACCAGC TTGGCTTCCT GATGCAGGGC
GATGGTGAAA CTGAGAAAAT AGCGAATACC GACGCCAGTT GGAAAATTTA CCAGAACCCG
GCCTATTCGC CTATCAAAAA CGACATTCCT AAGCTCAGAA CGTATATCGT GGCCGGTGAC
GGCGACCGGG TCGATGCCGC TAAATACCCC TGGGGCTGGG AGCAACCCAA TTTCGACGAT
AAAGCCTGGG TAGCCGCCAA ACCGCTTGGG TTTGGCACTA AACCCCGTGG CTTTGGTACC
GATGGCAACT GGCAGTTGGT GCCACGCACT ATTCCCATGA TGGAGGAAGG CGTAGTTCGG
CTGGCGACCG TTCGACGGGT GGTAAACGGC AAAATGGATA ATGCTTTTTT GCAGGGGAAA
GCCCCGGCCA CCGTTGCGGC CAACACCAAA GCCGTTTTCC TGCTCGATCA GGGGCATCTG
ACCAACGCTT ACCCTGAACT GACCGTTAGC CAGGGCAAAG GGGCCACCGT TACGCTGGCT
TATGCCGAAG CACTGGTCAA CGCAAAGAAT CAGAAAGGGA ATCGTAACGA AGTGGAAGGA
CGGACAATGC TTGGGTTCGA AGACCAGTTT ATTGCCGATG GAACCAGCAA ACGAACCTTC
CGCCCGCTCT GGTTTCGCAC CTACCGATAC CTGCAACTGA CGGTCGAGAC CAAAGACGAA
CCGCTGGTGC TGGACGATCT GCTGGGGCAG TTTACCGGCT ATCCATTTCA GGAAAAAGCC
CAGTTTGCAG CCAGTGACAC CACCCTGAAA TCCATCTGGA ACGTGGGCTG GCGAACGGCC
CGGCTTTGTG CGGGCGAAAC CTATTACGAC TGCCCGTATT ATGAACAACT GCAATACACC
GGCGATACCC GCATTCAGTC CATGATTTCC CTGTACGTTA CGGGCGACGA CCGGCTAATG
CGAAAAGCCA TCATGGACTA TGAGCATAGT CGGTTCAATG ACGGCCTCAC GCAGAGCCGT
TACCCGTCGG CCGATTTTCA AGTTATTCCC ACATTTTCGC TGTTCTGGGT CTGCATGATT
CATGATTACT GGATGCATCG GCAGGACGAC GCTTTTGTGA AGTCGATGTT GCCCGGCATC
CTGAGTGTGC TGGAATGGCA CGAAAAACGA ATTGCCAAAA CCGGCCTGAA CGGCCCTTTA
GAGTGGTGGA ATTTTGTGGA CTGGTCGGCC TGGAAAAATG CAAAAGACGA AACCAGTGGC
GGTGTACCGG CCGGAGCACG GAAAGGCGGG TCGAGCATCT TGTCCCTGCA ACAAGCCTAC
ACTTATTTTC GGGCGGGCGA TTTGCTGGCG CATTACGGGC AAAACGAACG GGCGGAACAT
TACCGCGAGC TGGGGCGGAA GCTTAACAAA GCAGTCTTTG CCCAATGCTA CGATGCTGGA
CGGGGTCTTT TTGCCGATAC ACCTGACAAG ACATCATTCA GCCAGCACGC CAATATTCTG
GCGGTGTTGA CCGATGCCGT GCCCGCTGCC CAGCAGGCGG CACTGGTGCA GAAAACCATG
ACCGATACAA CGCTGACACA GGCTACTTTC TACTTTAAGT TCTATCTGTT CGAAGCCCTC
AAAAAAACCG GCTTGGGTGA CCAATTTATA ACTCAGCTAA AGCCCTGGCG CGACATGCTG
GCGATGGGCC TGACTACCTT CGCCGAAAAT CCGGAACCTA CTCGCTCCGA CTGCCACGCC
TGGAGCGCAT CACCGCTGTA CGAATTTTTA TCCACTACTT GCGGCATTAG GCCAGCTGAG
CCGGGCTTCA AATCGGTACG TATCGAGCCA TACATGGGTG ATTTGACCAG CGTTGACGGA
AAAATGCCGC ACCCATTAGG TGAGATTGCC GTGCAGTTTC AAAAAACGGC AACTGGTGGA
CTAACGGGTA ATGTGACGCT ACCTGCAAAT CTGACGGGCA CGTTGCGCTG GAAAGGGAAA
TCGCTACCGT TGAAGGCTGG TAAGCAGACG GTGAGTTTAT AA
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| Protein sequence | MTWFRFLFFI VLFPVSTFAQ TPTPPDWTNQ YWPARWILHP TSPARQYGIY HVRKAIELAQ
KPARFVVHVS ADNRYRLFVN GKAVAMGPAR SDTQNWNYET LDLAPYLQAG RNVLAAQVWY
MGEGAPFAQM SYQLGFLMQG DGETEKIANT DASWKIYQNP AYSPIKNDIP KLRTYIVAGD
GDRVDAAKYP WGWEQPNFDD KAWVAAKPLG FGTKPRGFGT DGNWQLVPRT IPMMEEGVVR
LATVRRVVNG KMDNAFLQGK APATVAANTK AVFLLDQGHL TNAYPELTVS QGKGATVTLA
YAEALVNAKN QKGNRNEVEG RTMLGFEDQF IADGTSKRTF RPLWFRTYRY LQLTVETKDE
PLVLDDLLGQ FTGYPFQEKA QFAASDTTLK SIWNVGWRTA RLCAGETYYD CPYYEQLQYT
GDTRIQSMIS LYVTGDDRLM RKAIMDYEHS RFNDGLTQSR YPSADFQVIP TFSLFWVCMI
HDYWMHRQDD AFVKSMLPGI LSVLEWHEKR IAKTGLNGPL EWWNFVDWSA WKNAKDETSG
GVPAGARKGG SSILSLQQAY TYFRAGDLLA HYGQNERAEH YRELGRKLNK AVFAQCYDAG
RGLFADTPDK TSFSQHANIL AVLTDAVPAA QQAALVQKTM TDTTLTQATF YFKFYLFEAL
KKTGLGDQFI TQLKPWRDML AMGLTTFAEN PEPTRSDCHA WSASPLYEFL STTCGIRPAE
PGFKSVRIEP YMGDLTSVDG KMPHPLGEIA VQFQKTATGG LTGNVTLPAN LTGTLRWKGK
SLPLKAGKQT VSL
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