Gene Slin_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4240 
Symbol 
ID8727999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5117031 
End bp5117891 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content54% 
IMG OID 
Productbeta-lactamase domain protein 
Protein accessionYP_003389023 
Protein GI284039093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.838901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA GACCCATTGA TATTGGCCCT TTTAAACTGG ATGGAGGAGC CATGTTTGGC 
GTTGTGCCAA AAACCATCTG GCAGAAACAG TGCCCCGCCG ATGACCGAAA TCTCTGCGAC
TGGGCCTTAC GCTGTTTACT CGTTGAAAAT GGCAACCGCC TTATGATCGT CGATACTGGT
ACTGGCGATA AGCAGGACGC TAAATTTTTT GGTTTTTATG ATCTGCCCAA CGGAAAAACC
CTAACCGGTG CGGTTGAGAA GGCCGGTTAT TCGGTAAACG ACGTGACCGA TGTGTTATTG
ACTCACCTGC ATTTCGACCA CGCGGGCGGG GCTGTTCGCT ATGCCGATGC GGGGCGTACA
ACACTCGAAG CCACGTTTCC GAAGGCCGCT TACTGGAGCC ATAGCGGGCA GTGGGATTGG
GCAACGAACC CTAACCCCCG TGAGCGGGCC ACCTATCTGC GCGAGAACTT CATGCCCCTC
CAGGCCAACG GCCAACTTCG CTTTACGGAT AAAGAAGACC TGAACCTGCC CGGTGTTGAC
TTACTGTACA TGGACGGGCA CACCGAGAAA ATGACGCTGC CGATGTTTCA GCTCGTGGGA
AGCACGGGTC AGCCGCGCAC CGTCGTATTT TGCGCTGATC TGATTCCGTC GGTCGCCCAC
GTGCCCGTTC CTTACGTTAT GGGTTACGAC GTTCGGCCAC TGCTGACGAT GGACGAGAAA
ACACAGTTTC TTAACCGGGC GGTTGATGAA AACTGGCTGC TGGTCTTCGA TCACGACCCC
GTTTATGAAG CGGCCACCGT TGAGCGTACC GAAAAAGGTA TCCGGGTAAA CGAGAAGGGT
ACCCTGACTG AGTTGTTGTA A
 
Protein sequence
MTIRPIDIGP FKLDGGAMFG VVPKTIWQKQ CPADDRNLCD WALRCLLVEN GNRLMIVDTG 
TGDKQDAKFF GFYDLPNGKT LTGAVEKAGY SVNDVTDVLL THLHFDHAGG AVRYADAGRT
TLEATFPKAA YWSHSGQWDW ATNPNPRERA TYLRENFMPL QANGQLRFTD KEDLNLPGVD
LLYMDGHTEK MTLPMFQLVG STGQPRTVVF CADLIPSVAH VPVPYVMGYD VRPLLTMDEK
TQFLNRAVDE NWLLVFDHDP VYEAATVERT EKGIRVNEKG TLTELL