Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4240 |
Symbol | |
ID | 8727999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5117031 |
End bp | 5117891 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | beta-lactamase domain protein |
Protein accession | YP_003389023 |
Protein GI | 284039093 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.838901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA GACCCATTGA TATTGGCCCT TTTAAACTGG ATGGAGGAGC CATGTTTGGC GTTGTGCCAA AAACCATCTG GCAGAAACAG TGCCCCGCCG ATGACCGAAA TCTCTGCGAC TGGGCCTTAC GCTGTTTACT CGTTGAAAAT GGCAACCGCC TTATGATCGT CGATACTGGT ACTGGCGATA AGCAGGACGC TAAATTTTTT GGTTTTTATG ATCTGCCCAA CGGAAAAACC CTAACCGGTG CGGTTGAGAA GGCCGGTTAT TCGGTAAACG ACGTGACCGA TGTGTTATTG ACTCACCTGC ATTTCGACCA CGCGGGCGGG GCTGTTCGCT ATGCCGATGC GGGGCGTACA ACACTCGAAG CCACGTTTCC GAAGGCCGCT TACTGGAGCC ATAGCGGGCA GTGGGATTGG GCAACGAACC CTAACCCCCG TGAGCGGGCC ACCTATCTGC GCGAGAACTT CATGCCCCTC CAGGCCAACG GCCAACTTCG CTTTACGGAT AAAGAAGACC TGAACCTGCC CGGTGTTGAC TTACTGTACA TGGACGGGCA CACCGAGAAA ATGACGCTGC CGATGTTTCA GCTCGTGGGA AGCACGGGTC AGCCGCGCAC CGTCGTATTT TGCGCTGATC TGATTCCGTC GGTCGCCCAC GTGCCCGTTC CTTACGTTAT GGGTTACGAC GTTCGGCCAC TGCTGACGAT GGACGAGAAA ACACAGTTTC TTAACCGGGC GGTTGATGAA AACTGGCTGC TGGTCTTCGA TCACGACCCC GTTTATGAAG CGGCCACCGT TGAGCGTACC GAAAAAGGTA TCCGGGTAAA CGAGAAGGGT ACCCTGACTG AGTTGTTGTA A
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Protein sequence | MTIRPIDIGP FKLDGGAMFG VVPKTIWQKQ CPADDRNLCD WALRCLLVEN GNRLMIVDTG TGDKQDAKFF GFYDLPNGKT LTGAVEKAGY SVNDVTDVLL THLHFDHAGG AVRYADAGRT TLEATFPKAA YWSHSGQWDW ATNPNPRERA TYLRENFMPL QANGQLRFTD KEDLNLPGVD LLYMDGHTEK MTLPMFQLVG STGQPRTVVF CADLIPSVAH VPVPYVMGYD VRPLLTMDEK TQFLNRAVDE NWLLVFDHDP VYEAATVERT EKGIRVNEKG TLTELL
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