Gene Slin_4232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4232 
Symbol 
ID8727991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5105318 
End bp5106343 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content37% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389016 
Protein GI284039086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.183267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAGCTA CGATTGAAAA TGAAGCTCGT TTCGATAATG TACAGCAATT GGTTCAAGCT 
TTGGCAGAGC TAAAAGTAAG GTTACTTCAG TTTAAGCCTG ATTTGCTTCC CATTAAACTA
CCGGATGATT TGCAAATAGG TGAACTTCAA GTTGTATACT TAAACTTAAA GAACGCCTTA
AATACGTATC AGCTTTCAAA GAAGGTTAAT AGTTACGATA AACAGATAAT AGGTATTAAA
CAGCGCATTC GACTTTATAG CAATCTGCAA TTACAATTGG AACGTCAAAA GAATACCCGA
CTCGAAGATT TAGCATTAGC TGAAAAGATT TTAAACACCA GTCGAAAACT TTTTTCAGAT
AGAGTTATTG CTGAAGTTGA GTTTACTCGC AGCCAACAAG AGTATCTTCA CGTAAAACAG
CAGTTAGAAG CTATTGAGAT TAGCCTTGCT AATAACCAGA TTTTAATAAA ACAGTTTGAA
GCCCAAATAA TTGACCTTGA TGTAAGACAG TTGGAGATTA ATGAGCGACT ACTTACTGAT
ATAAAGACTT ACCATCGCCA ACTAGAAAGC CAACTAATTA CTTATCAACA AACATATTGG
TTGGAAGCAC CAATAGCAGG GCGGGTTACA TTGCTACGTT TCTTGAATAA CCGCCGTTAT
ATAACAGCAG GAACTGAACT GATAACGATT GTACCGTCAA TGCAGCCAAT TTATGGACAA
GCATTTGTCC CTATCGCAAG GTCTGGCAAA GTAGAGGTTG GACAAAAGGT CAACGTTAAG
TTTGATAATT TTCCATACAA TGAGTTTGGC TTTGTCGTAG GATATATTGC AGCAGTGTCA
TCGGTACCAC GCGATGGCGT ATACACAGTT CGAATTACGT TTCCCAAAGG CCTTATAACT
AATTATAATA AAAAATTATT ATTCAGGCAG GAGATGACCG GAAGTGCTGA TGTGATAACT
GCTGATATTA GTCTATTCAA TAGAGTATTT TATCAGATAC GCTCCATTTT TGTTCGGTTT
TCATAG
 
Protein sequence
MLATIENEAR FDNVQQLVQA LAELKVRLLQ FKPDLLPIKL PDDLQIGELQ VVYLNLKNAL 
NTYQLSKKVN SYDKQIIGIK QRIRLYSNLQ LQLERQKNTR LEDLALAEKI LNTSRKLFSD
RVIAEVEFTR SQQEYLHVKQ QLEAIEISLA NNQILIKQFE AQIIDLDVRQ LEINERLLTD
IKTYHRQLES QLITYQQTYW LEAPIAGRVT LLRFLNNRRY ITAGTELITI VPSMQPIYGQ
AFVPIARSGK VEVGQKVNVK FDNFPYNEFG FVVGYIAAVS SVPRDGVYTV RITFPKGLIT
NYNKKLLFRQ EMTGSADVIT ADISLFNRVF YQIRSIFVRF S