Gene Slin_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4153 
Symbol 
ID8727912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5003024 
End bp5003893 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content54% 
IMG OID 
Productcyanophycinase 
Protein accessionYP_003388939 
Protein GI284039009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTAC CTAAAGGAAA ACTAATTCCG ATTGGCGGAA GTGAAGCAAA AGATCAGGAG 
AACACAAGTA CGTCCAGCGA ACTGCGCCAG TCGAACTTTT TTGAGTCCGG CATTCTGGCC
GAATTCCTGG CCGAAGTGAA CGGGGAAAAT TCCCGGATTG AGGTGATTCC GGCGGCTTCC
GAAATTCCCG AAGAGATGGG GCAGAGCTAT CTGGATGCGT TTGCGAAGCT GGGCTGCAAA
CACGTACACG TTATGTACAT CGACAGCCCC GAAGACGCCG ATAAACGCGA GAATCTGGAA
CGCATCGACA AGGCCGATGG GGTCTTGTTT ACTGGGGGCG ATCAAACCCG GCTGGTCGAT
AAACTGCTGG ACACCGTGCT ACTGGCAAAA ATTCATGAGC GGTATCAGCA GGATAATTTC
GTCATTGCCG GTACCAGCGC CGGGGCGGCT GCCATGCCCA GACTGGCCAT TAAAGAAGGG
AAGAGTGCGG AGTCGCTCAT TAAGGGTATG GTCGAAACCG AAAAAGGATT GTCTCTGCTG
CCCGAAGCCA TTATTGATAC CCACTTCATG CAGCGCAGCC GCTTTCCCCG GCTCACCGAA
GCCCTGCTGC GTAACCCCGG CTTGCTGGGC ATCGGGCTTT GTATCGATTC CGGCGTTGTG
ATTTCGCAGG GGGATGTACT GCGGGCCATC GGAACCGGGG GCGTATTTGT CATTGATGCG
GATAACGTGC GGGATTCCAA CTACTACGAA GTCCCGGAGC TTCAGCCGGT TTATGTCAAT
AATTTACGCG TCAATATCCT GGCCAAAGGA GCCTCGTATT TCCTGAAAGA CCGGATTTTT
ACCCGAACGG CAGAGACAAG CTTTTCCTGA
 
Protein sequence
MAVPKGKLIP IGGSEAKDQE NTSTSSELRQ SNFFESGILA EFLAEVNGEN SRIEVIPAAS 
EIPEEMGQSY LDAFAKLGCK HVHVMYIDSP EDADKRENLE RIDKADGVLF TGGDQTRLVD
KLLDTVLLAK IHERYQQDNF VIAGTSAGAA AMPRLAIKEG KSAESLIKGM VETEKGLSLL
PEAIIDTHFM QRSRFPRLTE ALLRNPGLLG IGLCIDSGVV ISQGDVLRAI GTGGVFVIDA
DNVRDSNYYE VPELQPVYVN NLRVNILAKG ASYFLKDRIF TRTAETSFS