| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4146 |
|---|
| Symbol | |
|---|
| ID | 8727905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4994534 |
|---|
| End bp | 4995829 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | citrate/H+ symporter, CitMHS family |
|---|
| Protein accession | YP_003388932 |
|---|
| Protein GI | 284039002 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCGT TACTTGGCTT TGCCACCATT GCCGTTTTTC TGGTGTTGAT TATCACCAAA
CGATTGTCTG TCATTACGGC GCTGGTGCTG GTGCCAGTCA TCATGGGTTT CCTGGCGGGA
TTCAGCCCGA AGGAACTGGG TGAGATGATT CTGGCGGGTA TCAAGCAGGT GGCACCGACG
GGTATTCTGC TCATGTTTGC CGTGCTGTAT TTTGGTACCA TGCTCGATGT GGGCCTGTTC
GACCCAATCA TCTCGGCCAT CATCCGCTTC GTGAAGGGTG ATCCACTGAA GGTTATTCTG
GGAACGGCGG TACTGACCAT GATCGTCCAC CTTGACGGTG ACGGTACGGC GACGTTCATG
ATCGTGATGT CGGCGTTTTT GCCGATCTAC AAACAGCTGG GTATCAACCG GCTGATCCTG
ACGGGAATCG TGGCGCTGAG CGTAGGGCCT ATGCACCTGG TGCCCTGGTC AGGAACCTCG
GCGCGGGCAA TCTCGACACT AAAAACGGAC GCCACGCAGT TATTCAATCC CAATGTACCG
GCCATTGTAG CCGGTATTGG CTGGGTACTT TTGGTAGCTT ACTGGTTCGG CCTGAACGAG
CGAAAACGTC TGGGTGTTAG TGAGCTGAAC TACGTGCATC GGGAAAGTCT CACCGACGAA
CAGCGTCAGT TTCGCCGTCC GCGCTTATTC TGGGTCAACG CCGTGCTGAC GGTTGGGTTA
ATTACTACGC TTATGAAAGG CTGGGTTCCG GCACCGGCCC TGTTTATTTC GGCGGCTATT
GTCGCACTGC TGATCAATTA CCCTCGTTTG CCCGATCAAC AGAAAGTGCT CCGAAGCCAC
GGCAACAACA TTTTTATGGT GTCGAGTATG ATCTTTGCGG CCGGTGTGTT TTCGGGCATC
CTGACCGGTG GTAAGATGAT CGACGCGATG GCAACGTCGG TCGTTTCGCT GATTCCGCAG
CAACACGCAG CCTGGCTCCC CACGCTGACG GCCATCACCA GCATGCCTGC CAGTCTGCTC
TTTACGCCCG ATGCTTATTA TTTCGGCGTT GTTCCTATCC TGAGCCAGAC CGCCACGCAG
TTCGGCATCG ACCCGCTGGA AATTGGCCGG GCTGCGTTGC TGGGCCAGAT GACGGTCGGT
TTTCCGGTTA GTCCGCTCAC AGCCTCCACT TTTCTGCTGG TTGGTCTGGC CGACGTGGAT
TTGGGCGATC ATCAGAAATT TATTCTTAAA TGGGCTTTCG GCACAACCGT CGTTATGACG
CTGGCGGCCC TGTTAACCGG CTCTATTCAC GTATGA
|
|---|
| Protein sequence | MLSLLGFATI AVFLVLIITK RLSVITALVL VPVIMGFLAG FSPKELGEMI LAGIKQVAPT
GILLMFAVLY FGTMLDVGLF DPIISAIIRF VKGDPLKVIL GTAVLTMIVH LDGDGTATFM
IVMSAFLPIY KQLGINRLIL TGIVALSVGP MHLVPWSGTS ARAISTLKTD ATQLFNPNVP
AIVAGIGWVL LVAYWFGLNE RKRLGVSELN YVHRESLTDE QRQFRRPRLF WVNAVLTVGL
ITTLMKGWVP APALFISAAI VALLINYPRL PDQQKVLRSH GNNIFMVSSM IFAAGVFSGI
LTGGKMIDAM ATSVVSLIPQ QHAAWLPTLT AITSMPASLL FTPDAYYFGV VPILSQTATQ
FGIDPLEIGR AALLGQMTVG FPVSPLTAST FLLVGLADVD LGDHQKFILK WAFGTTVVMT
LAALLTGSIH V
|
|---|
| |