| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4109 |
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| Symbol | |
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| ID | 8727868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4947115 |
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| End bp | 4948845 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_003388895 |
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| Protein GI | 284038965 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0273732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTTT ACTCTCCTGT TGTCGAAACG ACCCTGCTCA TCGAGGGAAA AAAAATTCCA
ACGTTCCACT CCATAACCTT ACAGCAGTCT ATTCATACCA CACATGAATT CCGGGTTGTT
TTTGAACATG AGTCCGTTGA CGAATTAGTG GTGCTGTTCT CCGATCAACC TGAAAAATTG
AATCGAAAAT CAATAGAGCT TACCGTCAAA GCAGCTGGTG AGGGGCCTCC GCTGCAGTTT
AAGGGCGTGA TTACCCAAAC CGAATTAAAA CAGCAGGATG ATGGCTACTG GGGGCAAATG
ATCATAAGCG GACACGGTCA TTGTGAATCC CTGCTGACGA TAGCCGGTAC CCAGACGTTC
ACCGATTTAT CGATAACCGA TATTGTAAAT AAATGCCTGA GTAGCTACAC GCAGGTGAAA
AATGTGTCTG GCAGCGTAAA ACCCGCCAAG CTACCGTTTT GTGTTCGCTA TACAGAGTCG
GTCTGGCACT TCATAAAGCG GCTGGCATAC GATTTTGGGG CCTGGTTCTA TTACGATGGG
TCAGTACTTC GATTCACGAC CAGCCCGGGT ACAACTTCTA CGTTAAACCT GACCTTTGGC
GCCAATTTAA CGCACTTTCG CACGGGCGTC CGAGCGGTAC CCGCTTACTT TAAACAGTAC
GACTATTTAG CCGAAGAAGA CAAACGGCTG GAATCGGAAG CAGCCAAAGA CAAAACTCCT
TATGACAAGC CGGAAACGAG TGGTGTCATT ACGCCCCATC CGGCCCAGAC AGCTGCCGAT
ATGCCCGATT ACCGCGACAG TCGCCATGCT TCCCTAACCG CCGAAGAAAA ATATATGGAA
GGGCAAGCTC GGGTTCCGGG CCTGTTTCCG GGCAGTAAAA TCGTGGTTAA GGATTCTGAA
AGAGGAAAAG GCGGGCAATC AGCCCCTTAC CTCGTCACCG ACATTGTTCA CTACGTAAGT
GGTGTTGGCG AGTACACAAA CAGGTTTCGG GCCATTCCGG CCGATGTAGC CGCTATGCCC
GTGCGCAAAT TGGTTCGCCC GCTGGCCCAA ACGCAGATTG GTCAGGTTAC TGACATTAAA
GACCCCAAAG GCATGGGGCG GGTAAAGGTA AGGCTGCTTT GGATGAGTGG CTCGGAATCG
ACCCCCTTTA TCCGGATGAC TCAGCCGCAC TTCGGGGTTC ATACGGATAA CAAAAAAACG
CGCGGCTTTC AATTTGTGCC AACCATTGGC GACCAGGTCA TGGTCGGCTT TGAGTACAAC
AACCCCGAAC GTCCCTTTGT GATTGGCGCC TTACCCCACG GTAAAAACAG TGGTATGGAC
ACCAGTAAGC CCGATGAAGA AAAGCACATC AGCGTAGGAA GTGGCAGTAC GCTGACGTTT
ATTGAAAAAC CCAGCGTGAA AGAAATTCAT CTGCAAGTCG ATGAAAAGAA CTTCGTCAAG
ATCTCCGTAC CGAGTGCGGG TGGTGATATA ACGATCAACT CTTCGAAAAA TATTGTTGTC
AAAGCCACCG CGAAAGTGAC CATCGAAGCT CCCGAAATCG TGTTATCCGG AAACACCATT
ACCTTAGATG CCAAACAGGC GGTCAATATT AAAGGCACAC AGGTTAAAGT AGAAGCATCA
GCCCAGATGA ACATCAAAGG AGCCATGACC GATGTGGAAG GGTCGGGTAC GCTAAACGTC
AAAAGCTCAG GCATGACAGC CATTAAAGGA TCAATGGTTA TGATTAATTA G
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| Protein sequence | MPVYSPVVET TLLIEGKKIP TFHSITLQQS IHTTHEFRVV FEHESVDELV VLFSDQPEKL
NRKSIELTVK AAGEGPPLQF KGVITQTELK QQDDGYWGQM IISGHGHCES LLTIAGTQTF
TDLSITDIVN KCLSSYTQVK NVSGSVKPAK LPFCVRYTES VWHFIKRLAY DFGAWFYYDG
SVLRFTTSPG TTSTLNLTFG ANLTHFRTGV RAVPAYFKQY DYLAEEDKRL ESEAAKDKTP
YDKPETSGVI TPHPAQTAAD MPDYRDSRHA SLTAEEKYME GQARVPGLFP GSKIVVKDSE
RGKGGQSAPY LVTDIVHYVS GVGEYTNRFR AIPADVAAMP VRKLVRPLAQ TQIGQVTDIK
DPKGMGRVKV RLLWMSGSES TPFIRMTQPH FGVHTDNKKT RGFQFVPTIG DQVMVGFEYN
NPERPFVIGA LPHGKNSGMD TSKPDEEKHI SVGSGSTLTF IEKPSVKEIH LQVDEKNFVK
ISVPSAGGDI TINSSKNIVV KATAKVTIEA PEIVLSGNTI TLDAKQAVNI KGTQVKVEAS
AQMNIKGAMT DVEGSGTLNV KSSGMTAIKG SMVMIN
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