Gene Slin_4097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4097 
Symbol 
ID8727856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4931635 
End bp4932492 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content52% 
IMG OID 
ProductOmpA/MotB domain protein 
Protein accessionYP_003388883 
Protein GI284038953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.386824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.160252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAGGC TACTGATCTT ATGGATAGCA CTGGGCGTGT GGGTAACTGT ATCCGTTTAC 
GTGCATCTGG CTTATATTAA ACGTATAGGG TTTTCGCCAG ATCCCGTATT GCCTGCCGTG
CCAATAATCG ATGGGCCCCG GCTGCGTATT AAACTGCCGG GAAGTCTGTT CCATAAGGCT
GAGAGTACCC TGCGGCAATC GGATAAGCCC TCGGCGCTGG ATACGCTGGC GGCATATCTG
ATCAATCATC CGCGCCGGTT GCTGACAGTG GTCGGTTACC ATACTCCGGC TGAAAACAAG
CTGACGTTGA TGCCCAATTT AGGGGTAATG CGGGCTGATG TTGTCCGGCA GTATCTGGTG
AGCGCCGGGG TGCCGGAAGA TCAGGTGCAG ATTCAGGGAC AGGCGTCGGA ACTGTTAAAC
TTCATCAAAG ACTCAACAAG TGCCTTGTCT TTTTCTTTTC AGGCGATAAC CATCAATGCC
GACTGGCTGG CCCGGCACCA GAAATACATC GACCTGTTCC ATCCGCTCCA GTTGTATTTT
CCCACGGGCA GCACAGAACA CATAGTAACA CCGGATAATG AGCAGTTCGT GCGCGAAGCC
ATTACATACC TGTACAATCA CCCAACGGAA CGGCTCACCA TTACGGGACA TACAGACAGC
ACAGGCACTG AAGCTTTCAA TCTTAAACTG TCGCGGCTAC GGGCAATGGT CGTGCGCGAC
AAGCTTATTA AACAGGGAGC GTCGAAACGC TGGATTCAGG TGATAGCCAT GGGCAACAAA
CTACCCATAG CGCCCAACAA CCTGCCCGAA GGCCGGGAAG CTAATCGACG CGTAACGTTA
CTGGTAAAAA AACGATAG
 
Protein sequence
MGRLLILWIA LGVWVTVSVY VHLAYIKRIG FSPDPVLPAV PIIDGPRLRI KLPGSLFHKA 
ESTLRQSDKP SALDTLAAYL INHPRRLLTV VGYHTPAENK LTLMPNLGVM RADVVRQYLV
SAGVPEDQVQ IQGQASELLN FIKDSTSALS FSFQAITINA DWLARHQKYI DLFHPLQLYF
PTGSTEHIVT PDNEQFVREA ITYLYNHPTE RLTITGHTDS TGTEAFNLKL SRLRAMVVRD
KLIKQGASKR WIQVIAMGNK LPIAPNNLPE GREANRRVTL LVKKR