| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4078 |
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| Symbol | |
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| ID | 8727836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4907104 |
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| End bp | 4908153 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_003388864 |
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| Protein GI | 284038934 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.433116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.249189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCCTT TTTCCACCGG TCTGGCCTTG CGTATGCTCT GGCAGGAACG GCGTAAGGTA
CTGTTCTTTC TGGTTGTTTT TGTGCTATTG GGCGTTGTCG TATCCCTGCT TATGCAACCC
GAATTTCGGT CGGAGGCCCG GCTGATGCCC GAAATGAGCA GCAGTTCGGG CGATGTACTG
AAGCGGCTGG CGTCGGTGGC GGGGTTTGCG GGTGTCGATT TACTGGATGA GGGGGTGGAG
GCCGTCCGGC CCGATCTGTA CCCGAGTTTA TTGCAGAGCA CGCCTTTTGT TCTGTACCTG
ATTCAACAGC CAGTCACCGT ATCGGATGGA CGTGTGCAAA CCATAGGCGA ATTTCTGGAG
AGACAGGCAA GCCCGTGGTG GGGGAGCCGG TTGCTCACGC GCGGCCACGA AGATACCAAA
CCGTTACGTC TGGCTGCCGG AACGCTGCAA CTCAGCGTTC GTCAGCACCA GCTTACCGAC
GAAATCAGCG AACGGGTAAG TGCTAAATTT GATACCCGTT CGGGCATTAT TACCATCACG
GCTACCATGC CCGATGCCGG TGTGGCGGCC ACCGTGGCGC AACTGGCCAT GAACTACCTG
ACCCGGTACG TGCGGCACTA CCGGACCGAA AAAGCACGGC AGGATTTAGG CTTCTACCGG
CAGCAACTGG ACGAAGCCCG TAGGCGATAC CATTTGGCGC AATTGACCTT GTTTCGATAC
AATGAACAGC ACAGGAATAT AGTTCTGCTT TCTACAACCA TGGACCGGCA GCGGATGGAG
GCCGAACTGA CGATTGCGCA AACAGTTTAT ACAGAACTGG CTGGACAGTT TGAGCAATCG
AAGTTAAAGG TACAGGCCCG TACGCCCATC TTTAAGATCC TCGAACCACC TAAAGTGCCA
TTCCGGCGGG TAGCACCCAA ACGAACATTG GTTGTGTTGC TGTTTGCCGG GCTAGGGCTG
GCGCTGGGTG GCCTGTATGT ACTGGCCCAA AATCCGGCCA TCTTTACCTC AATACGGGCT
CGATTGTGGC CCGGAGAAAA CAATGTTTAA
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| Protein sequence | MLPFSTGLAL RMLWQERRKV LFFLVVFVLL GVVVSLLMQP EFRSEARLMP EMSSSSGDVL
KRLASVAGFA GVDLLDEGVE AVRPDLYPSL LQSTPFVLYL IQQPVTVSDG RVQTIGEFLE
RQASPWWGSR LLTRGHEDTK PLRLAAGTLQ LSVRQHQLTD EISERVSAKF DTRSGIITIT
ATMPDAGVAA TVAQLAMNYL TRYVRHYRTE KARQDLGFYR QQLDEARRRY HLAQLTLFRY
NEQHRNIVLL STTMDRQRME AELTIAQTVY TELAGQFEQS KLKVQARTPI FKILEPPKVP
FRRVAPKRTL VVLLFAGLGL ALGGLYVLAQ NPAIFTSIRA RLWPGENNV
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