Gene Slin_4076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4076 
Symbol 
ID8727834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4904738 
End bp4905760 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388862 
Protein GI284038932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.264494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG TCATTGTTGG AAGCCGGACG TTCGACTCAT TCGAGTACAA TCTGTGCGAT 
TCGTTCAGGA TGCTGGGGCA TGATGCATCC ATCATTGACA TAGTGGATGT GCTGCCAGTA
TCGGTTCGGC TAAACTACTG GGTGTCGCGT TTCATCGAGT CCTACGATCG GTTGGTGAGT
GTTCGGCTGG CCAACAAGGT GGCGCTGCTT CGACCCGATC TGGTGCTTGT TGTATATCGA
AACCTGCATC CGATGATCGT AAGCCAGATT AAAGACCACT GGCCCGCTGC CCCCGTGGTT
CAAATCAATC CGGATGCACT GTCGAACCTC GAAAAGCAGC AGATCATTGC CGCCGATTTC
GATCATTATT TCTCCAAAGA ACCCTTTATC GTTGATTTTC TGACAAACAA GATCGGTGCC
AGCGCGCACT ACCTGCCCGA AGGGTTCAAT CCACGCATTC ACCGCAGGCC AGCCATCGAG
AAAACCATTG CCGAATGGCT TACCGAGATC GATGTCCTGG TGTTCGGGAA TTTATACGCT
TATCGGGCTC GTATGATCGA ACACCTCATG CGGGCGGGTA TCAAAGTGGC GGTCTACGGA
ACCGAGGGGC CTTATATGCG CCCGGTTATT CGGTCGGTTT TTCGGAAGCA ATACCTTGTT
GGCCTTAACA AAAATCGGTT GTTGTACGGA GCTAAAATTG TTTTCAACAA TTTTCACTAT
GCGGAGATAA CATCGGTTAA CCAGAAGTAT TTCGAGATCA ACGGAATTGG GGCCTTTCAG
CTTTCCGATT ATAAACCCAC CATTGAGGAA TACACGGGTG TACCGGCCGA TATGGTGACG
TACCGGTCGG TGGATGAAGC CATTGAGAAG ATCCGGTATT ATCTGGCCCA TGCCAGCGAA
CGACATGAAC TGGCTGATCG GCAGTATACT CATTTTCAGC AAAACCATAC CCTCGACCTG
CGTGCCGGTC AGTTGTTGCA TACCGTGGGG ATACCGGAAG CATCGGCAAC CGCAGTGGTC
TGA
 
Protein sequence
MKIVIVGSRT FDSFEYNLCD SFRMLGHDAS IIDIVDVLPV SVRLNYWVSR FIESYDRLVS 
VRLANKVALL RPDLVLVVYR NLHPMIVSQI KDHWPAAPVV QINPDALSNL EKQQIIAADF
DHYFSKEPFI VDFLTNKIGA SAHYLPEGFN PRIHRRPAIE KTIAEWLTEI DVLVFGNLYA
YRARMIEHLM RAGIKVAVYG TEGPYMRPVI RSVFRKQYLV GLNKNRLLYG AKIVFNNFHY
AEITSVNQKY FEINGIGAFQ LSDYKPTIEE YTGVPADMVT YRSVDEAIEK IRYYLAHASE
RHELADRQYT HFQQNHTLDL RAGQLLHTVG IPEASATAVV