Gene Slin_4046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4046 
Symbol 
ID8727804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4863624 
End bp4864730 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content41% 
IMG OID 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_003388833 
Protein GI284038903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.467766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAG TCAGACATGT ACTCGGTATA TCGGGCGGCA AAGACAGTGC GGCTTTAGCC 
ATCTATATGC GCCAACGGTA TCCCGAGTTA GATATCGAGT ACTACACCTG CGATACAGGT
AAAGAACTGG AAGAAACGTA CCAACTTATC AAAAATCTTG AGGGCTTTTT AGGTAAGTCA
ATCAAACTAC TTCAAGCTGC TGATAAAAGT ACACAAGACC CGTTCGACCA TTATTTGAAC
TTGTATGGCG GTTTCTTGCC GTCGTCGAAC TCACGTTGGT GTACTAAAAA GCTTAAGCTT
GAACCGTTTG AAAAGTTCGT AGGCAACGAC CCCGTTATAT CTTATGTGGG TATTCGGGGT
GACGAAGACC GGGAAGGATA TATTTCTAAA AAATCAAATA TACAGTCGAT TTTTCCCTTT
CGTAAAAACA TATGGAGCGA AGATGTAGTA AGCAAGGTTC TCGCAAACGC AAACCTGTCT
GTAATTGCTG ACCTATACGG GCAACTGCCT AAAGCCAGTT TAAGCGACCG CTTTGATGAA
TTACTGAGTA AGCCTGTTTC ATTTAGTTTT CCACAAAGTC AAAAATTAAA CTTGCTGCTC
GATGTTGATA CCCAACGGTT CAATGAGCTG GTATTTGCCT TTTTAAAACA AACCAATTAT
CCATTAGCAC AGGAAGACTC ATTTCCACTT CTTGATAACG ATGAGGTATT AGTTCGCGAC
GATATATTCA GACTACTTGA AGAAAGTGGT GTCGGTGTAC CAGCTTATTA CAACAAAGTT
GACTTTACAG TTAACGAAAA AAAAGGACAG TACTCACGCA GTAGGTCAGG CTGCTATTTT
TGCTTTTACC AGCAAAAAAT TGAGTGGATT TGGCTATATG AGCAACATCC TGACAAATTT
GCACAAGCAT TGGCCTATGA AAAAGATGGC TACACCTGGA ATGACGAGGA AACCCTCGAA
GACATGGTTA AGCCACAGCG AATGCAGGCG ATAAAAGAAG AATACATCAA ACGTACAAGC
CGTAATGCAC AAAAATTAAA ATCTCCGTAT CTCTTAGATA TCCTCGGCGA TGCAGAAGGT
GAAGGATGTG CGGCTTGTTT TATTTAG
 
Protein sequence
MTKVRHVLGI SGGKDSAALA IYMRQRYPEL DIEYYTCDTG KELEETYQLI KNLEGFLGKS 
IKLLQAADKS TQDPFDHYLN LYGGFLPSSN SRWCTKKLKL EPFEKFVGND PVISYVGIRG
DEDREGYISK KSNIQSIFPF RKNIWSEDVV SKVLANANLS VIADLYGQLP KASLSDRFDE
LLSKPVSFSF PQSQKLNLLL DVDTQRFNEL VFAFLKQTNY PLAQEDSFPL LDNDEVLVRD
DIFRLLEESG VGVPAYYNKV DFTVNEKKGQ YSRSRSGCYF CFYQQKIEWI WLYEQHPDKF
AQALAYEKDG YTWNDEETLE DMVKPQRMQA IKEEYIKRTS RNAQKLKSPY LLDILGDAEG
EGCAACFI