Gene Slin_4031 details

Gene Information

• Locus tag: Slin_4031
• ID: 8727789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 4843540
• End bp: 4846902
• Gene Length: 3363 bp
• Protein Length: 1120 aa
• Translation table: 11
• GC content: 53%
• Product: hypothetical protein
• Protein accession: YP_003388820
• Protein GI: 284038890

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.280222
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCCGACC TGTTCAGCCA CGCCCATGAA TCCAGCGCAC CTTCACTTCA CCTGAGTGAT 
GTGCTTCAGG AAGAGTACAA CTTCATCCAC GACATTATCC CTGCTCCTCC CGAAATACCG 
TTGACCGATC ATGATCAAGA CCAGCCCGAT TCGGAGGATG TTCACCGGTT CAGGGTCAGT 
GAACCGGTCG AATTGTTCAG GAAGCTGGAG GCCGAGCGAG AACACATTGA GGCTACTGCG 
AAAACAGCCT TACCGAAACA GACACATACT GAAACATCCT ATACCCGTCT GGCCGAGTGG 
CTTGCCGAAA AACCCCTGCG TGAAGACCTC GTCAGAGATA CCCTTATAGC CAAAGCCGCG 
AACCCCGATT TATTGACTGA AGAACCCTGG TTACTGAACG CAGCTTTACG GCCTTACACT 
CGGGGGTTGC TTAAGCGTTA TCTACAATGG AAAGATGGAC GACACAAGGA CACCACCCAT 
TTCCCAACCG ACGAATTGAA CCAGCTTTTG CTGGAAGATG CCTTCGCGGA GCACATCGTG 
CCCAGAGAAA AATCCGCATT AGACACGATT TTCGGTAAAA TGCTCGGTAC GTACCAGAGT 
GCCTTATGCC TGTCGGGCGG GGGTATCCGA AGCGCCACCT TTGCGCTGGG TGTCATGCAG 
GGCCTCGCTC AGCACAACCT GCTTGGGCGA TTCTCCTACC TCTCTACCGT ATCGGGCGGT 
GGGTATGTAG GCGGCTGGCT TAGTGCCTGG CGGCACCACG AAGGGCTGGA CAAAGTCATT 
ACCAAACTTA AGACTACCAG CAGTACGCCC ATTGCCAGTG AAGCTGACCC GATCCGGCAT 
CTGCGCCAAT TCAGCAACTA CCTGAGCCCG CAGTTGGGCC TATTCTCCGC CGACACCTGG 
ACACTCGTTG CCACCTATAC ACGTAACCTG CTGTTAATCT GGCTGGTGAT TCTGCCCTTT 
CTGGCGGCTC TCGCGGCCGT TCCCTGGGTA GGCGTTACCC TGGCCTCTGC CAAACTGAAT 
CCTGGCGATA CCATTTGGTT CTGGATTATG GGGAGTTTAC TGGCGGTAGC GGGTGCGTTG 
TCCGTGATGG CTGTCTATTT TGTCCATTCG TACATACCGA CACCCGAAAC AAAAAAACCG 
TCCGAAAAAA AACTCACCGA CATTCCCCTG AAATCAGACC GGGATCAAAC CGCGTTCATT 
AACAAGTGCC TGCTGCCGTT CTCCGTCGCT GTTCTTTTGT TGATACTGGT GTGGATCTGG 
TTCACTAAAC TGGACTCAAC CAGTACACAT TGGGCGGGCA ATATATATAG ATCGCTGGGA 
CTCAACCAGC GAACCGGACT GAACATTTTC TCGGAGGGAG GCTACTGGAT TATGGGCGGT 
ACCACACTGG CCCACGTCAT AGGCTGGCTA CTGGCCCGGC CAACACCGAA GAAGTTTTAC 
TTACAGTTCC TGATGTTTCT GGTGATCGCC GTTGTAGGAG CTATGGCAGG TTTTTTGTTA 
TTGCTGACCG CCAAACTGTT GCGTTCATCA TCCATAGAAT TGTACACCTG TCTGGCTTTT 
CCCTGTTTTA TGCTGTCCAT TTTGCTGGTT GGTTATTTCT TTGAAGGCGT TGTCAGCCGA 
TACCTCGACG ATGCCCGACG CGAATGGACG GCCCGGTACA GCGCCTGGCT GCTGATTGCG 
GCCCTGGGCT GGCTCGTTTT ATCGAGTGTC ATCCTGTTTG GACCGGGGCT TATTGACGCC 
ATAAAGCTGC AAGTCGCCAG CATTGGCCTT GGTTCGGGTA TTTTAACGGC TCTGCTTGGA 
GGAAGTGCGC AGAGTGCCGG GCGGGGCGAG GGTGCCGGAT CGCGTCAGGG AAAAGGCAAC 
GCGTCGGGCA TCATCGGGTT ACTATCCCAA TTCAGCCTGC CCATTGTCGC TACGCTGACC 
ATCTTTATCC TGATGGTCAT GCTTTCGCTG CTGAACCAAA CGCTGGCCGG GCTGCTGACG 
GATCAGCTTT ATGACTGGTT CGGCGACAAT ACATCTGGCC GTATCCTAAC CGTTTTTACC 
CCTCTGATTC TGCTCATCCT CTTTCTGGTG GCAGGCTGGC TGCTGGCTCT GATGATCGAT 
ACCAATCGGT TTTCGCTCCA TGCGATGTAT AGAGCCCGGC TGATCAGGGC GTATCTGGGG 
GCCTCGCGTC CGCAGGAAAC ACGCACCCCC GACCCGTTCA CTGGCTTTGA TGAAGACGAT 
AATATTCCCA TGGGCCAATT GAAGGTGGAT TCCTATACGA CACCGACTAC AAATACGCCG 
AACGAGGTTG GCCCCGAAAC TAAACCAGAA GCAACGCCAA AGAAGCCCCT GTTTCATATT 
ATAAATCTGG CTCTCAACCT GGTAAACGGG CAGAATCTGG CCTGGCAGGA GCGAAAAGCG 
GAAGCGTTTT CCATTTCACC CCTGCACGCC GGAGCCATGA ATCTGGCGTA TCGGCGAACC 
CGCGTCAAAA TCAACCCTAC TGATTACCGC TCCGGGCAAG AAAACCCGGC TTTGTCGACA 
CCGGAGTATA ACTGTTATGG CGGTAAAAAA GGTATCAGTT TAGGTACAGC CATAACCATA 
TCGGGAGCGG CTGCCAGCCC GAATATGGGT TATCACTCAT CTACTCTGGT TGCTTTTCTG 
ATGACCTTAT TCAACGTCCG GCTTGGCTGG TGGCTGGGAA ACCCCGGTCC GGCGGGCGAC 
AAGACGTTTG ATAAGTCGAC GCCCGACCTG GCCGTTAAAC CCATCTGGGA TGAACTTCAG 
GCCAATACCG ACGATACTAA CGAATATGTG TACCTGTCGG ATGGCGGGCA CTTCGAGAAT 
CTGGGCCTTT ATGAAATGGT GTTACGGCGC AACCGGTTTA TTGTCGTGAG CGACGCCAGC 
TGCGACGAAT CCTGTACGCT GGAAGACCTG GGCAATGCAA TCCGTAAAAT CCGTATTGAC 
CTGGGTATAC CCATCGAATT TCAGGGCAAC TTCCCCATTC AGGCCCGGTC AACCAATGGG 
GTCAATGCAG AAGGAAAATA CTGGGCACTG GCCCGCATTG GCTATTCCGC CGTTGATAAG 
CCGACTGCTG CAACAGACCC CGACGAGGTG GATGGTCTGC TGCTTTACAT TAAACCTGCT 
TTCTACGGCA ACGAACCCCG CGACATATTC AATTATGGCT CTACCAAAAG TGCTTTCCCC 
CACGAATCGA CGTCGGATCA GTTCTTTTCA GAAAGTCAGT TTGAAAGCTA CCGGGCGCTG 
GGCAGACATG CTTTCGAGAC CATGCATACC AGCTTCAAAA AAGAAGCCGG TGTAGAATTA 
AATGAACTGT TTACGAAAAA TGGACTTGCC CTCCACTGGA AGTTCATGAA GACCAAAAGC 
TAG 

 

Protein sequence

MPDLFSHAHE SSAPSLHLSD VLQEEYNFIH DIIPAPPEIP LTDHDQDQPD SEDVHRFRVS 
EPVELFRKLE AEREHIEATA KTALPKQTHT ETSYTRLAEW LAEKPLREDL VRDTLIAKAA 
NPDLLTEEPW LLNAALRPYT RGLLKRYLQW KDGRHKDTTH FPTDELNQLL LEDAFAEHIV 
PREKSALDTI FGKMLGTYQS ALCLSGGGIR SATFALGVMQ GLAQHNLLGR FSYLSTVSGG 
GYVGGWLSAW RHHEGLDKVI TKLKTTSSTP IASEADPIRH LRQFSNYLSP QLGLFSADTW 
TLVATYTRNL LLIWLVILPF LAALAAVPWV GVTLASAKLN PGDTIWFWIM GSLLAVAGAL 
SVMAVYFVHS YIPTPETKKP SEKKLTDIPL KSDRDQTAFI NKCLLPFSVA VLLLILVWIW 
FTKLDSTSTH WAGNIYRSLG LNQRTGLNIF SEGGYWIMGG TTLAHVIGWL LARPTPKKFY 
LQFLMFLVIA VVGAMAGFLL LLTAKLLRSS SIELYTCLAF PCFMLSILLV GYFFEGVVSR 
YLDDARREWT ARYSAWLLIA ALGWLVLSSV ILFGPGLIDA IKLQVASIGL GSGILTALLG 
GSAQSAGRGE GAGSRQGKGN ASGIIGLLSQ FSLPIVATLT IFILMVMLSL LNQTLAGLLT 
DQLYDWFGDN TSGRILTVFT PLILLILFLV AGWLLALMID TNRFSLHAMY RARLIRAYLG 
ASRPQETRTP DPFTGFDEDD NIPMGQLKVD SYTTPTTNTP NEVGPETKPE ATPKKPLFHI 
INLALNLVNG QNLAWQERKA EAFSISPLHA GAMNLAYRRT RVKINPTDYR SGQENPALST 
PEYNCYGGKK GISLGTAITI SGAAASPNMG YHSSTLVAFL MTLFNVRLGW WLGNPGPAGD 
KTFDKSTPDL AVKPIWDELQ ANTDDTNEYV YLSDGGHFEN LGLYEMVLRR NRFIVVSDAS 
CDESCTLEDL GNAIRKIRID LGIPIEFQGN FPIQARSTNG VNAEGKYWAL ARIGYSAVDK 
PTAATDPDEV DGLLLYIKPA FYGNEPRDIF NYGSTKSAFP HESTSDQFFS ESQFESYRAL 
GRHAFETMHT SFKKEAGVEL NELFTKNGLA LHWKFMKTKS