Gene Slin_4004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4004 
Symbol 
ID8727762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4815362 
End bp4816264 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content51% 
IMG OID 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_003388793 
Protein GI284038863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.199981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000792158 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTAC TGACCGCTTT ACTACTTCCT CTGCTTAGCA TTGCCACCGC AAACGGTCAG 
GCACCCACGG CAGATCAGGT TCGGCAATTC ATTGCTAAAT CTATTACGGA TCTGCACATA
CCTCCTACAC CCGTTGGGGC AATCGACAAT CGGTTTGTGC AGACGGGTAG CGATTCAATA
GCAATTCGAA TTTACAGACC CGCTACTACC AGCGTTACGC CGAGCCGTCC TCTGCCCATT
ATTTACCACG TTCATGGTGG TGCCTGGGTG GCTGGCGATT TAGATACGCA TGATAACATT
TGCCGACTGT TGTGCCACGA TGCACAGGCA GTAGTGGTGG CCGTACATTA CCGACGTCCG
CCCGAATTCC CGTATCCAGC TTCCGTCGAC GATGTGATGA CTGTTCTGTC CTGGATTCAG
GCGAACCGAA AGAACCTCAG TCCAACAGGA CCATTGATTC TACTGGGTGA TAGCGCCGGG
GGTAATTTTG TTGCCTCTAC CTGCCTGAAA AATGCGGAGT CTACCCAACC TGTGCCCATT
GCGGCTCAAG TGCTAATCAA CCCTGCTCTT GATGTGCGAC CGGGTTCGGT TACGTTCAAA
AATTATGAGA TATTCATAGA ATGGGGGTTA CCAGACATAA AAAAAGCCAA TGACCCGCAT
GCTTCACCTC TCCTTTCAAA CCAGTTAAAT AAGATGCCAC CTACCAGCAT TGTCGTTGGC
GAGATTGATG AAATAAGGGA GGATGGTGTA CTGATGCACC AGAAATTACA GGCTGCCGGC
GTGAAGAGCA CACTGTTCGA TCAGCCGAAA GCCGGGCACT TTGGCGGGTA CTGGTGCGCT
GGCCACCAAT CGGCAAAACC AGCTCTGGAC TTCGTACTGC AACAGATTAA AGCCGTCAGG
TAA
 
Protein sequence
MKLLTALLLP LLSIATANGQ APTADQVRQF IAKSITDLHI PPTPVGAIDN RFVQTGSDSI 
AIRIYRPATT SVTPSRPLPI IYHVHGGAWV AGDLDTHDNI CRLLCHDAQA VVVAVHYRRP
PEFPYPASVD DVMTVLSWIQ ANRKNLSPTG PLILLGDSAG GNFVASTCLK NAESTQPVPI
AAQVLINPAL DVRPGSVTFK NYEIFIEWGL PDIKKANDPH ASPLLSNQLN KMPPTSIVVG
EIDEIREDGV LMHQKLQAAG VKSTLFDQPK AGHFGGYWCA GHQSAKPALD FVLQQIKAVR