Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4004 |
Symbol | |
ID | 8727762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4815362 |
End bp | 4816264 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Alpha/beta hydrolase fold-3 domain protein |
Protein accession | YP_003388793 |
Protein GI | 284038863 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.199981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000000792158 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACTAC TGACCGCTTT ACTACTTCCT CTGCTTAGCA TTGCCACCGC AAACGGTCAG GCACCCACGG CAGATCAGGT TCGGCAATTC ATTGCTAAAT CTATTACGGA TCTGCACATA CCTCCTACAC CCGTTGGGGC AATCGACAAT CGGTTTGTGC AGACGGGTAG CGATTCAATA GCAATTCGAA TTTACAGACC CGCTACTACC AGCGTTACGC CGAGCCGTCC TCTGCCCATT ATTTACCACG TTCATGGTGG TGCCTGGGTG GCTGGCGATT TAGATACGCA TGATAACATT TGCCGACTGT TGTGCCACGA TGCACAGGCA GTAGTGGTGG CCGTACATTA CCGACGTCCG CCCGAATTCC CGTATCCAGC TTCCGTCGAC GATGTGATGA CTGTTCTGTC CTGGATTCAG GCGAACCGAA AGAACCTCAG TCCAACAGGA CCATTGATTC TACTGGGTGA TAGCGCCGGG GGTAATTTTG TTGCCTCTAC CTGCCTGAAA AATGCGGAGT CTACCCAACC TGTGCCCATT GCGGCTCAAG TGCTAATCAA CCCTGCTCTT GATGTGCGAC CGGGTTCGGT TACGTTCAAA AATTATGAGA TATTCATAGA ATGGGGGTTA CCAGACATAA AAAAAGCCAA TGACCCGCAT GCTTCACCTC TCCTTTCAAA CCAGTTAAAT AAGATGCCAC CTACCAGCAT TGTCGTTGGC GAGATTGATG AAATAAGGGA GGATGGTGTA CTGATGCACC AGAAATTACA GGCTGCCGGC GTGAAGAGCA CACTGTTCGA TCAGCCGAAA GCCGGGCACT TTGGCGGGTA CTGGTGCGCT GGCCACCAAT CGGCAAAACC AGCTCTGGAC TTCGTACTGC AACAGATTAA AGCCGTCAGG TAA
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Protein sequence | MKLLTALLLP LLSIATANGQ APTADQVRQF IAKSITDLHI PPTPVGAIDN RFVQTGSDSI AIRIYRPATT SVTPSRPLPI IYHVHGGAWV AGDLDTHDNI CRLLCHDAQA VVVAVHYRRP PEFPYPASVD DVMTVLSWIQ ANRKNLSPTG PLILLGDSAG GNFVASTCLK NAESTQPVPI AAQVLINPAL DVRPGSVTFK NYEIFIEWGL PDIKKANDPH ASPLLSNQLN KMPPTSIVVG EIDEIREDGV LMHQKLQAAG VKSTLFDQPK AGHFGGYWCA GHQSAKPALD FVLQQIKAVR
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