Gene Slin_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3963 
Symbol 
ID8727721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4758453 
End bp4759124 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388752 
Protein GI284038822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.818225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCA ACGCACAAAC CAACGTTTCA ACGCAGTTAA TCGTCCACAA AACAGATGAT 
TTTCAGGTAA ACGGAAACGG CGACAACAGC GCCTGGAACA AAACAGACTG GGTACCCATC
ACGATTCAGG AGTCGGCCGG TCGAAAGCTA GGCACGAAGA CCAAAACGCT GTATTCATCC
ACCGGCATGT ATTTCCTCTT TCAGTGCGAG GACGAAACGT TGACCGCTAC GATACAGGAG
GACTTTGGGG CGTTGTACAA CGAAGATGTG GTGGAAGTGT TTCTCTGGCC CGATGAATCC
GTACCTATCT ATTTTGAATA CGAACTGTCG CCCCTGAATT ACGAACTCCC CATTCTGGTA
CCGAATCTTA ACGGCAAATT CATGGGCTGG AAACCCTGGC ATTACACGGG TAAATCGAAA
GTGCAGCACG CAACCAGCAT TCAGGGTGGC GAGAAGGTGA GCAAGGCAGC TATCAAGGGC
TGGACAGCCG AGTTTTTCAT TCCCTATACG TTATTAAACC CCCTCGTTCA GGCCCCACCT
ACTTCGGGCA CCCGCTGGCG TGGTAACCTG TACCGCATTG ATTACGACAA GGGGTATCAA
ACCTGGTCGT GGCAAAAAAC GAGTGGCAGC TTTCACGAAT TCCACAAGTT CGGAACGCTG
ATTTTTGAGT AA
 
Protein sequence
MPVNAQTNVS TQLIVHKTDD FQVNGNGDNS AWNKTDWVPI TIQESAGRKL GTKTKTLYSS 
TGMYFLFQCE DETLTATIQE DFGALYNEDV VEVFLWPDES VPIYFEYELS PLNYELPILV
PNLNGKFMGW KPWHYTGKSK VQHATSIQGG EKVSKAAIKG WTAEFFIPYT LLNPLVQAPP
TSGTRWRGNL YRIDYDKGYQ TWSWQKTSGS FHEFHKFGTL IFE