Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3963 |
Symbol | |
ID | 8727721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4758453 |
End bp | 4759124 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388752 |
Protein GI | 284038822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.818225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCA ACGCACAAAC CAACGTTTCA ACGCAGTTAA TCGTCCACAA AACAGATGAT TTTCAGGTAA ACGGAAACGG CGACAACAGC GCCTGGAACA AAACAGACTG GGTACCCATC ACGATTCAGG AGTCGGCCGG TCGAAAGCTA GGCACGAAGA CCAAAACGCT GTATTCATCC ACCGGCATGT ATTTCCTCTT TCAGTGCGAG GACGAAACGT TGACCGCTAC GATACAGGAG GACTTTGGGG CGTTGTACAA CGAAGATGTG GTGGAAGTGT TTCTCTGGCC CGATGAATCC GTACCTATCT ATTTTGAATA CGAACTGTCG CCCCTGAATT ACGAACTCCC CATTCTGGTA CCGAATCTTA ACGGCAAATT CATGGGCTGG AAACCCTGGC ATTACACGGG TAAATCGAAA GTGCAGCACG CAACCAGCAT TCAGGGTGGC GAGAAGGTGA GCAAGGCAGC TATCAAGGGC TGGACAGCCG AGTTTTTCAT TCCCTATACG TTATTAAACC CCCTCGTTCA GGCCCCACCT ACTTCGGGCA CCCGCTGGCG TGGTAACCTG TACCGCATTG ATTACGACAA GGGGTATCAA ACCTGGTCGT GGCAAAAAAC GAGTGGCAGC TTTCACGAAT TCCACAAGTT CGGAACGCTG ATTTTTGAGT AA
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Protein sequence | MPVNAQTNVS TQLIVHKTDD FQVNGNGDNS AWNKTDWVPI TIQESAGRKL GTKTKTLYSS TGMYFLFQCE DETLTATIQE DFGALYNEDV VEVFLWPDES VPIYFEYELS PLNYELPILV PNLNGKFMGW KPWHYTGKSK VQHATSIQGG EKVSKAAIKG WTAEFFIPYT LLNPLVQAPP TSGTRWRGNL YRIDYDKGYQ TWSWQKTSGS FHEFHKFGTL IFE
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