Gene Slin_3933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3933 
Symbol 
ID8727691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4716395 
End bp4716940 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content50% 
IMG OID 
ProductDNA topology modulation protein 
Protein accessionYP_003388722 
Protein GI284038792 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.27673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCGTTATTGT CGGTTGTGGA GGTGCAGGCA AATCCACATT AGCCCGGCAG 
CTTGGCGAAG TACTTCACTT GCCTGTTATT CATTTGGATG CCCAGTTCTG GAAACCGGGC
TGGAAAATGA TTTCCAAAGC GGAAGAAGTT GTGGTGTTAA ACCAGCTGAC GAATCAGTCG
AGCTGGATCA TCGACGGCAA CTACAACGCG ACCATGGGCC TTCGCTTCGA AGCGGCCGAC
ACCATTATTT TTCTGGATTT TCCCGTATTC CTGTGTCTTC GGCGCGTAAT CAAACGGTTT
ATTACCTACC GGGGCAAGAG TCGCCCTGAC ATGAGCCCCG GCTGCCCCGA GAAAGTGGAC
TGGCGTTTTC TGGGCTGGAT TTTAACCTAC AAATACCTCA ATCGTCCGCA GGTATTGAAG
CGAATCAGCG AACACCTCGA TAACCGTACT ATCCTGATTT TCAAACAGCC CGGTCAGCTA
AAAAAGTTTT TAAACAGTTT GGCGCAAACG AATAGGGCCC GCGTTCTCGA CCAGGTTAGC
CGGTAA
 
Protein sequence
MKKIVIVGCG GAGKSTLARQ LGEVLHLPVI HLDAQFWKPG WKMISKAEEV VVLNQLTNQS 
SWIIDGNYNA TMGLRFEAAD TIIFLDFPVF LCLRRVIKRF ITYRGKSRPD MSPGCPEKVD
WRFLGWILTY KYLNRPQVLK RISEHLDNRT ILIFKQPGQL KKFLNSLAQT NRARVLDQVS
R