Gene Slin_3930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3930 
Symbol 
ID8727688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4713341 
End bp4713925 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF162 
Protein accessionYP_003388719 
Protein GI284038789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC GCGATCAGAT GCTGGCCAGC ATTAAGGCGA ATCAGCCTGC CATGCGGCCC 
ATTCCGGCCA ACTTTACGTT CACGTCCGTT TACCCTGACC TGACGCAGCA ATTTATTGAC
ATACTCACGT TTGTGGGCGG TGCCGCCCTT GTGGTACCGG ATTTTGCATC TATCCGGGCT
TCATTGCAGA CGCAGTTTCC AAATATAACA AGTGTGGCGA CGACCTGCCC GGAACTCGCT
GATCTGGCCG ATGTAACGAT GAACGTTACG GACCCGCACG AGTTATCGGG GCTAAATCTG
GCGATTATCG AAGGGCCGCT GGCGGTTGCT GAGAATGCGG CTATCTGGGT CGATGAGCGC
CAACTACCCC AGCGGGTAGC GCCTATGATT ACGCAATATC TGGTAATCAT CATCCGGCAG
TCGACTATTG TGCCCAACAT GCATGACGCG TATAAGCTGT TAAAAGTCGA TGAAACCGGT
TTCGGGACGT TTATCTGCGG CCCCTCTAAA ACCGCCGATA TCGAGCAGAG TCTGGTGATT
GGCGCCCACG GTGCCCGGTC ATTGATGGTC TATATCCTGC CGTAA
 
Protein sequence
MTTRDQMLAS IKANQPAMRP IPANFTFTSV YPDLTQQFID ILTFVGGAAL VVPDFASIRA 
SLQTQFPNIT SVATTCPELA DLADVTMNVT DPHELSGLNL AIIEGPLAVA ENAAIWVDER
QLPQRVAPMI TQYLVIIIRQ STIVPNMHDA YKLLKVDETG FGTFICGPSK TADIEQSLVI
GAHGARSLMV YILP