Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3930 |
Symbol | |
ID | 8727688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4713341 |
End bp | 4713925 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | protein of unknown function DUF162 |
Protein accession | YP_003388719 |
Protein GI | 284038789 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC GCGATCAGAT GCTGGCCAGC ATTAAGGCGA ATCAGCCTGC CATGCGGCCC ATTCCGGCCA ACTTTACGTT CACGTCCGTT TACCCTGACC TGACGCAGCA ATTTATTGAC ATACTCACGT TTGTGGGCGG TGCCGCCCTT GTGGTACCGG ATTTTGCATC TATCCGGGCT TCATTGCAGA CGCAGTTTCC AAATATAACA AGTGTGGCGA CGACCTGCCC GGAACTCGCT GATCTGGCCG ATGTAACGAT GAACGTTACG GACCCGCACG AGTTATCGGG GCTAAATCTG GCGATTATCG AAGGGCCGCT GGCGGTTGCT GAGAATGCGG CTATCTGGGT CGATGAGCGC CAACTACCCC AGCGGGTAGC GCCTATGATT ACGCAATATC TGGTAATCAT CATCCGGCAG TCGACTATTG TGCCCAACAT GCATGACGCG TATAAGCTGT TAAAAGTCGA TGAAACCGGT TTCGGGACGT TTATCTGCGG CCCCTCTAAA ACCGCCGATA TCGAGCAGAG TCTGGTGATT GGCGCCCACG GTGCCCGGTC ATTGATGGTC TATATCCTGC CGTAA
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Protein sequence | MTTRDQMLAS IKANQPAMRP IPANFTFTSV YPDLTQQFID ILTFVGGAAL VVPDFASIRA SLQTQFPNIT SVATTCPELA DLADVTMNVT DPHELSGLNL AIIEGPLAVA ENAAIWVDER QLPQRVAPMI TQYLVIIIRQ STIVPNMHDA YKLLKVDETG FGTFICGPSK TADIEQSLVI GAHGARSLMV YILP
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