Gene Slin_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3922 
Symbol 
ID8727680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4705213 
End bp4705593 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388711 
Protein GI284038781 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.220909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.393919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAA CCTTCACGAA ATCCGAACGT CTTTGCAGCA AAAAGATTCT TGGTGAATTA 
TTTAAAAAAG GTAGTGCATC CGTACGGACG TTCTACCTTT TTCCGTTTCG AGTGCTATAC
ATTCCCCAGC CCGAACCGGG TCCGGACAGC GAGCCGCTTC TGCCCGCTAT TGTCATTACC
GTTCCCAAAC GCATCTTCAA ACGCGCCGTT GACCGCAATC AGATCAAACG ACGCGTCCGG
GAAGCCTACC GCCTGAATAA GGCTCTTTTC AGCCAAACCG GCACCCCACC GGCTACCATT
GCCTTTCTTT ATACGGCCAA ACAAATAATT TCGTTTGAAG AGATAGAAAA AGGTATGAAA
TTAGCTTTAA AGAAAATGTA G
 
Protein sequence
MPQTFTKSER LCSKKILGEL FKKGSASVRT FYLFPFRVLY IPQPEPGPDS EPLLPAIVIT 
VPKRIFKRAV DRNQIKRRVR EAYRLNKALF SQTGTPPATI AFLYTAKQII SFEEIEKGMK
LALKKM