Gene Slin_3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3885 
Symbol 
ID8727643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4660538 
End bp4661014 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content52% 
IMG OID 
Producthydrogenase maturation protease 
Protein accessionYP_003388674 
Protein GI284038744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.445128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.911983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CTGCCATTAT GGGTTTCGGC AATCCGGTTC GTTCTGACGA CGGCGTGGGT 
TGTTACGTGA TCGACCGGCT CCGGGAATCA CTGGGTGAGC AGCCCGATAT TGGTCTGTTC
GATATGGGTA CATCGGCCTT CGAAGTACTG TTTCAGCTGC GGGGTCACGG GCGGATTCTG
ATCGTCGATG CGGTAGTTAA TACGGGCGAA GAACCTGGTA CACTTTACAA ACTGCCCGCT
CACGAGGTGG AAGCCGCCAT TGAAGACGAT CCGATGGTGT TTCTCCATAG TCTGAAATGG
AACCAGGCAC TGTCGTACGC CCGGAAGATT CTGCTCAACG ACTATCCCGA CGATGTACAG
GTCTATCTGA TTGCGGTCGA TAATACGAAG CTGGAAGTCA GCCTGTCCGA TGCCGTAAAA
GCCGCCGGTG ACCGCGTTGT TGCCTTAATT GAGGAATCAT TGTTGGTTAA TGGTTGA
 
Protein sequence
MKKTAIMGFG NPVRSDDGVG CYVIDRLRES LGEQPDIGLF DMGTSAFEVL FQLRGHGRIL 
IVDAVVNTGE EPGTLYKLPA HEVEAAIEDD PMVFLHSLKW NQALSYARKI LLNDYPDDVQ
VYLIAVDNTK LEVSLSDAVK AAGDRVVALI EESLLVNG