Gene Slin_3882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3882 
Symbol 
ID8727640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4658280 
End bp4658621 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content51% 
IMG OID 
Producthydrogenase expression/synthesis HypA 
Protein accessionYP_003388671 
Protein GI284038741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.897038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAA TTTCTCTGGT CCGTAACATT TTTCGAACGC TGGAAGAAGA ATTTCCGGCG 
GATATGAGCC GGATACGGGG AATTTACCTT AAGGCCGGAC TCCTCTCGAA CGTGCAACCC
ATTTTGATGC AGAATGCCTT TGCCGCCGTG CTGGAAGATG AGCCCCGCTA TCAGCAAACG
ACGCTGCACG TCGAAGTGCT GCCGATTCTG ATTCATTGCA ATGTGTGCGA CAAGACGACC
GAAGTGCAGC AGTATAAGTT TGTGTGCTCC TGCGGTAAAC CCAGCCGAAA CGTCGTACAG
GGCGAAGAAC TGCTGATCAG CAAAGTTGAG TTCGATGATT GA
 
Protein sequence
MHEISLVRNI FRTLEEEFPA DMSRIRGIYL KAGLLSNVQP ILMQNAFAAV LEDEPRYQQT 
TLHVEVLPIL IHCNVCDKTT EVQQYKFVCS CGKPSRNVVQ GEELLISKVE FDD