Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3881 |
Symbol | |
ID | 8727639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4657559 |
End bp | 4658287 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hydrogenase accessory protein HypB |
Protein accession | YP_003388670 |
Protein GI | 284038740 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.785177 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAC TAACCAAAAC TATGACAACT GCCAGACCGA AATCCAACCA GGCTTCTGTA GGAGCCGTAC AGTGCGAAAA TACAACACTT AACTTGCTTA AAGTCAATGA TTTTGTAGCA AAAGCCATTC GGGATCGCCT GCCCGATGTA CTGGTGATTA ACGTGTGTTC ATCGCCGGGA AGTGGTAAGA CCACCCTCAT GCAGGAAACC GGCAAGCGGC TCCGGGGGCG ACTGAACATG GCCGTTCTGG TGGGCGATCC CGAAACCGAA CGCGACGCTA TCCGGATGCG CGACGTGGGT ATCAACGCCC TGCAAATCGT AACGGGCGGC ATGTGCCATA TCGAAGCGCA GATGATCTAT CAGGCGCTCG ATCACATCGA CCTGACGGGT GTTGACCTGC TGTTCATCGA AAACGTAGGC AACCTCGTTT GTCCGGCCGC TTTCGACCTG GGTGAAGACT TCCGCGTCAC ACTGCTGGCA TCGACCGAAG GCGACGATAA GCCCAAAAAG TACCCGCGCA TGTTCCTGAC CAGCGAACTA ATGGTCGTGT CGAAAGCCGA TTTACTACCC TACGTTCCCT TTAAGGTAGA AAATGTGATT CAGGACGCCC GCGATGTGAA TCCCGATATT GAGGTACTCA CTATTTCGAG CACTACCGGC GAAGGCCTCG ACGCCTGGTG CAACTGGCTG CTGGCCAAAG TTGAGCAGAA GAAAGGCGTT GTTGCGTAG
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Protein sequence | MIELTKTMTT ARPKSNQASV GAVQCENTTL NLLKVNDFVA KAIRDRLPDV LVINVCSSPG SGKTTLMQET GKRLRGRLNM AVLVGDPETE RDAIRMRDVG INALQIVTGG MCHIEAQMIY QALDHIDLTG VDLLFIENVG NLVCPAAFDL GEDFRVTLLA STEGDDKPKK YPRMFLTSEL MVVSKADLLP YVPFKVENVI QDARDVNPDI EVLTISSTTG EGLDAWCNWL LAKVEQKKGV VA
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