Gene Slin_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3881 
Symbol 
ID8727639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4657559 
End bp4658287 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content53% 
IMG OID 
Producthydrogenase accessory protein HypB 
Protein accessionYP_003388670 
Protein GI284038740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.785177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAC TAACCAAAAC TATGACAACT GCCAGACCGA AATCCAACCA GGCTTCTGTA 
GGAGCCGTAC AGTGCGAAAA TACAACACTT AACTTGCTTA AAGTCAATGA TTTTGTAGCA
AAAGCCATTC GGGATCGCCT GCCCGATGTA CTGGTGATTA ACGTGTGTTC ATCGCCGGGA
AGTGGTAAGA CCACCCTCAT GCAGGAAACC GGCAAGCGGC TCCGGGGGCG ACTGAACATG
GCCGTTCTGG TGGGCGATCC CGAAACCGAA CGCGACGCTA TCCGGATGCG CGACGTGGGT
ATCAACGCCC TGCAAATCGT AACGGGCGGC ATGTGCCATA TCGAAGCGCA GATGATCTAT
CAGGCGCTCG ATCACATCGA CCTGACGGGT GTTGACCTGC TGTTCATCGA AAACGTAGGC
AACCTCGTTT GTCCGGCCGC TTTCGACCTG GGTGAAGACT TCCGCGTCAC ACTGCTGGCA
TCGACCGAAG GCGACGATAA GCCCAAAAAG TACCCGCGCA TGTTCCTGAC CAGCGAACTA
ATGGTCGTGT CGAAAGCCGA TTTACTACCC TACGTTCCCT TTAAGGTAGA AAATGTGATT
CAGGACGCCC GCGATGTGAA TCCCGATATT GAGGTACTCA CTATTTCGAG CACTACCGGC
GAAGGCCTCG ACGCCTGGTG CAACTGGCTG CTGGCCAAAG TTGAGCAGAA GAAAGGCGTT
GTTGCGTAG
 
Protein sequence
MIELTKTMTT ARPKSNQASV GAVQCENTTL NLLKVNDFVA KAIRDRLPDV LVINVCSSPG 
SGKTTLMQET GKRLRGRLNM AVLVGDPETE RDAIRMRDVG INALQIVTGG MCHIEAQMIY
QALDHIDLTG VDLLFIENVG NLVCPAAFDL GEDFRVTLLA STEGDDKPKK YPRMFLTSEL
MVVSKADLLP YVPFKVENVI QDARDVNPDI EVLTISSTTG EGLDAWCNWL LAKVEQKKGV
VA