Gene Slin_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3840 
Symbol 
ID8727598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4608321 
End bp4609043 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content46% 
IMG OID 
Productcytochrome c assembly protein 
Protein accessionYP_003388629 
Protein GI284038699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAC ATTGGTGGAA AGCCTTAACC ATTCTCATTC TGGCCTATGT CTTCCTAGCA 
GGTTTGATGA GCCCCGTTCC AAAATTACCC ATTTTACACG AAGCCATCCG CAATACATTC
TTCCATCCTC CCCTGTGGAT CGCCATGATG ACCTTGTTGT TAGCATCGGC CATTTTCTCG
ATCCGTTATT TAAGAAAGGG AAAGCTGGAT GATGATTTAA TCTCGGTGGA GTTGGCCAAT
ACCGCCCTGT TATTCGGGGT GTTAGGCTGT ATTACCGGGT CGGTTTGGGC TTATTTCGCT
TGGGGTGATT TGTGGCCCAA TGATCCGAAA ACCAATGGAG TAGCCGTTGG CATGCTATTG
TATCTAGCCT ATTTTGTGTT ACGGGGATCA GTGGATGATG AGATACGTCG TGCCAGGCTA
TCCGCAGTTT ATAACATCTT TGCCTTTGCT GTTTTTATTC CGCTTATCTT AATCCTACCC
CGATTGACGG ATTCGTTACA TCCTGGTAAC GGAGGGAATC CAGGGTTTAA CCAATACGAT
GCCGATAATT CAATAAAGCG CATCATCAGG CCTGCTTTTG TGGGCTTCAC TTTACTTGGT
TTTTGGATTA CTCAGCTTCG GGTTCGATTA CGCCGGTTGG AAACGCTATT AGATGAGCAG
GATGACCTGA ACAAGGCATC GACTAAGCAG TCATCCGATT TGCAAAATAC GTCAGACTTA
TAA
 
Protein sequence
MLKHWWKALT ILILAYVFLA GLMSPVPKLP ILHEAIRNTF FHPPLWIAMM TLLLASAIFS 
IRYLRKGKLD DDLISVELAN TALLFGVLGC ITGSVWAYFA WGDLWPNDPK TNGVAVGMLL
YLAYFVLRGS VDDEIRRARL SAVYNIFAFA VFIPLILILP RLTDSLHPGN GGNPGFNQYD
ADNSIKRIIR PAFVGFTLLG FWITQLRVRL RRLETLLDEQ DDLNKASTKQ SSDLQNTSDL