Gene Slin_3824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3824 
Symbol 
ID8727582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4593904 
End bp4594734 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content48% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003388615 
Protein GI284038685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTAA CCTACCGCGA AATTGCTACT AGGGAACGTT ATAGAGACTG TATTCAAAAG 
TTCTGGATTC TCGATAACAA CCTCAACTCT GTTTCTTCGG CCCCTCAATA CGCCTTGCCT
AACGGCTGCT GTACACTGGC CTTCATTAGC GGCAACGGCA TCTCGTTAAC TTTCGCCGGT
CATCCAATTC ATCTGGCAGC CGGTATTTAC CTATCCGGCC AAATTACCAG GAAGGTAAGC
GTTGTGATGA AGCCGTATTC CAAAGCAATT ATGGTACAAC TAAAGCCTTG GGTGCCGTCG
ATGATAACCA ACATTCCAGT ACACTCGTTT ACCGATGGTG TGGTCAGTCT TAAAGAGGTT
GATAGGCCCC TATACGAAAC GATGGCTAAT CTGAATGGGG ATGATGAGAC CGTCGTTATA
AATAAGGTAT GTGACGATTT TGTAAGCTGC TTACATCCCA ACACCGATAC TCATTTCATC
CAATGGGCCT TTAACAACTT ACAGAAGGGG CTGGTTAATC AGGAAACGAT TGCGGATATG
GTTCGCCGGT CGGGGTACTC CCAGCGCAGA ATGGAGCAGC AATTTAGACG CCTGATTGGT
CCCTCCGCCA AAGAAATGCA GCGTATCCTT CAGCTCAGGC AAGTCATTAG TGAGCTCCAC
CATCGAGAGC AGACCACTAC GTTAGGGGAG CTGGCCCATC AGCATGGCTA CTATGACCAG
GCTCATTTCA TCCGGGCTTA TCAGCGGGTG TTAGAGGAGT TGCCTTCTGC CTTTAGGCGG
GATAATTATC TGCTACCGGT CACTCCGCAT TTCGATTTTT TACAATTGTA G
 
Protein sequence
MLLTYREIAT RERYRDCIQK FWILDNNLNS VSSAPQYALP NGCCTLAFIS GNGISLTFAG 
HPIHLAAGIY LSGQITRKVS VVMKPYSKAI MVQLKPWVPS MITNIPVHSF TDGVVSLKEV
DRPLYETMAN LNGDDETVVI NKVCDDFVSC LHPNTDTHFI QWAFNNLQKG LVNQETIADM
VRRSGYSQRR MEQQFRRLIG PSAKEMQRIL QLRQVISELH HREQTTTLGE LAHQHGYYDQ
AHFIRAYQRV LEELPSAFRR DNYLLPVTPH FDFLQL