Gene Slin_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3823 
Symbol 
ID8727581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4592659 
End bp4593855 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content48% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003388614 
Protein GI284038684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGCC AGAGGTTTAT CATCTATACA GTGCTCATGT TTAGTGCAAC CCTGTCAATG 
GCCTTTGGGC AGTCCCGGTT TGATACGCTG ACCAGGGCCT TGCAGCGGGT CTACCAGAGC
GATAGCTTAC CGGGGCTATC CGTCGTATTG GTTAACGGGA AGACAATTAT CTATCAGCAC
AGCTTCGGGT ATGCCAACAT TGAGCAGCAG ATTAAGTACA GCACCAGGAG CATCCAGACT
ATTGGTTCGG TCAGTAAAAC ATTTGCCGCC ATCGCCTTGA TGAAAGCGGT TGAATTAGGC
TATTTTGATC TAGATACTGA TATTAATACC ATCCTGCCAT TCAAGGTGGT CAATCCGAAT
GCGCCGACCA GCCGCATAAC GGTGCGGCAG TTAGCGAACC ACACTTCCGG CATTGTTGAC
AATCCATCCA TCTTCTATGA CACCTATCAG TTCGATACCA CGCTGGCCGG ATATAGTCCG
ATGGCCTATG CCAATTTAAA AAGATTGGGT TTCAATCAGC AGGTGAGCGA TCGTTCACTG
GCCCGTTTTA TGTACGATTA CCTCAATGAA AAGGGGCAGT ATTACAGCAA ACAAAATTTT
GGTCTTGATG CCGCCGGCCG CTCGTCCAGC TATAGTAATA TTGGTTCCGC ACTGGCGGCC
TATCTGGTGG AGATTAAATC GGGCATGAGT TATGCCGACT TTACCAGGCA ATACATTTTC
CGTCCGCTTC GCATGCGTCA AACAAGCTGG TTTCTGGATG CGAAGCGCTT AACGCGGTAT
GCCCGGCCCT ACGATGACAA CTTTTCGGTC TTACCTTTCT ATCATCTAAT CACGTATCCA
GACGGGGGGC TACGAACCAA TACGTCCGAT CTGGGCAAGT ATCTAATTGC CCTGCTAAAG
GGTTACGAGG GCGGGGAGAA GCTGTTAAAA AGATCATCGT ATAGCGCCAT GTTTACCCCC
CAGTTCGCCA AAGAGTCTCC GCCAAAAGGT ATTCGTTTGA CGACGCGCAA CAAGGGTATT
TTTTGGAATC TGTACGTGAA TGGTACTATT GGGCATGATG GGGATGATCC GGGCGTTAGT
TCATTTTTGT TTTTCAATCC CAGGACTGGT CTGGGGGGTG TTTTTTTGAG TAACAAATAT
GTAGCTGACA AGAAGTCGAT TACGGATCTG CTCATGCAAT TTATTAGCAC ACGTTAA
 
Protein sequence
MRSQRFIIYT VLMFSATLSM AFGQSRFDTL TRALQRVYQS DSLPGLSVVL VNGKTIIYQH 
SFGYANIEQQ IKYSTRSIQT IGSVSKTFAA IALMKAVELG YFDLDTDINT ILPFKVVNPN
APTSRITVRQ LANHTSGIVD NPSIFYDTYQ FDTTLAGYSP MAYANLKRLG FNQQVSDRSL
ARFMYDYLNE KGQYYSKQNF GLDAAGRSSS YSNIGSALAA YLVEIKSGMS YADFTRQYIF
RPLRMRQTSW FLDAKRLTRY ARPYDDNFSV LPFYHLITYP DGGLRTNTSD LGKYLIALLK
GYEGGEKLLK RSSYSAMFTP QFAKESPPKG IRLTTRNKGI FWNLYVNGTI GHDGDDPGVS
SFLFFNPRTG LGGVFLSNKY VADKKSITDL LMQFISTR