Gene Slin_3805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3805 
Symbol 
ID8727563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4575615 
End bp4576226 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content55% 
IMG OID 
ProductNADP oxidoreductase coenzyme F420-dependent 
Protein accessionYP_003388597 
Protein GI284038667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.40299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.215809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCA CAATTGGTAT TATCGGTTCA GGCCATATTG GGCGTGGACT GGCTACGCAT 
TTAGCAAAAA CAACTTACCC AGTGCTGATC ACCAATCGCC GGGGACCAGC GTCGCTGACA
GACCTGGTCG CTTCCATTGG CGGATCGTTG AGTGCCGCCG ACCTTACCCA AACCATTGAA
CAGGCCGACG TTTTGTTCAT TGCCGCTCCC TGGACACAGC TCCCGGAGTT GGCTGGCCAA
CTACAGGGGT ACAGCGGGAA GATTCTGGTC GACGCCACCA ATAACATTGT CTCGGTTAGC
CCTTTCCAAC TGGCCGATAC GGCGGGTAAA CCAACGGGGG AACACGTAGC GAGCCTGTTT
CCGACTCATC GGGTCGTTAA AGCGTTTAAT ACCCTCCCGG CTGCTACGCT GGCTCAGCCT
TCGTCAGGTC GCCTGGGCAA TACCGTCATT GTTATCAGTG GTGATGATGG CGATGCGAAA
AAAGAAGTCG CCGATATTAC CAAAGCCATG GGGTTTGCAC CGGTCGATCT GGGCACATTT
CAGCAGGGCG GGCACCTGCA GGATATGGGC GGAGCCTTGT CTGGAGCTGA ATTCATCAAA
GTAAGCCGCT GA
 
Protein sequence
MSSTIGIIGS GHIGRGLATH LAKTTYPVLI TNRRGPASLT DLVASIGGSL SAADLTQTIE 
QADVLFIAAP WTQLPELAGQ LQGYSGKILV DATNNIVSVS PFQLADTAGK PTGEHVASLF
PTHRVVKAFN TLPAATLAQP SSGRLGNTVI VISGDDGDAK KEVADITKAM GFAPVDLGTF
QQGGHLQDMG GALSGAEFIK VSR