| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3804 |
|---|
| Symbol | |
|---|
| ID | 8727562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4574734 |
|---|
| End bp | 4575597 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Pirin domain protein |
|---|
| Protein accession | YP_003388596 |
|---|
| Protein GI | 284038666 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.672374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.22295 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACAAA GAACCATTGC CAGCCTGTAT ACACCGCCTG ACGAACGCGG CTTTCTGGGG
GCTGGTCATA TAGCCCGTAG TGTTTTGACC GGCGGTTTTC AAAAAACAGA TCCGTTCATT
TTCCTGATGG ACGACTGGCT GGATAAGAAG AATGACGAGC CCGCTGGTGG ACCTCATCCC
CACGCAGGCT TCGAAACCGT GTCGCTGCTG ATTGATGGGG AAATAAAGGA AATGCTGGAG
TCCATGAAAA AGGGGGACTT TCAAATTATG ACGGCAGGTA GCGGTACGAT CCACACCGAA
ACGATAGAAG GCCCCACCAA AGGGCGTTTG TTTCAACTAT GGCTGAACCT GCCCCGCAAA
GACCGCCAGG CTACACCACG TATTCAGATT CTACCCGCTG AACATGTTCC GGTGGTAAAC
AAAGAGGGCG TGTACATGCG GCTGTACAGC GGTTCACTGG CCGGTATCCA ATCACCCATA
CAACACTACA CACCGCTCAT TGTCGCCGAG TTTGAGCTGC AAGCAGGCGT TGGCACCAGC
GTTCAGTTGC CGGCCAGCTT CAACGCGTTT CTCTATGTCA TCAGCGGTTC CGTACAAATC
GCGGGTAAAG CCATAAACCA CGATCAGGTA GCGTGGCTGG ATGTTTTTGA TACCGAAGAA
GATAGCCAGC TGACGATGCA GGCGGGCGAA CAGGGGGTGC GTTTTGTGCT GTATGCGGCC
AAGCCGACCC ACGAGGCCAT TGTTTCCTAC GGGCCTTTTA TCGCCGACAC TCAGGCTGAG
ATTGCCGACC TGTACAAACA ATACCGAAAC GGGGCCATGA AGCACATCGC TACCGTACCG
GAAGCACAGA AACTGACCTA TTGA
|
|---|
| Protein sequence | MIQRTIASLY TPPDERGFLG AGHIARSVLT GGFQKTDPFI FLMDDWLDKK NDEPAGGPHP
HAGFETVSLL IDGEIKEMLE SMKKGDFQIM TAGSGTIHTE TIEGPTKGRL FQLWLNLPRK
DRQATPRIQI LPAEHVPVVN KEGVYMRLYS GSLAGIQSPI QHYTPLIVAE FELQAGVGTS
VQLPASFNAF LYVISGSVQI AGKAINHDQV AWLDVFDTEE DSQLTMQAGE QGVRFVLYAA
KPTHEAIVSY GPFIADTQAE IADLYKQYRN GAMKHIATVP EAQKLTY
|
|---|
| |