Gene Slin_3759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3759 
Symbol 
ID8727517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4522373 
End bp4523251 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content54% 
IMG OID 
ProductNmrA family protein 
Protein accessionYP_003388554 
Protein GI284038624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.791935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACTTA TTACCGGAGC CACCGGTCAA ATCGGCAAAG AACTTTGCCG ACTTTTGGCC 
CAATCACATA TCCCTGCCAG AGCTATGTGC CGCAACCAGG AACAATTCAC GCAATTTACC
CAAATTGGCC TGGAGGCTGT TCAGGGCGAC TTTGGCCAAC CGGATCAGCT TCGGAAAGCC
ATGCAGGGCT GCCAGCAGCT ATTTTTACTG ACGCCCCCTG TGCCCCAACA AGCCCAATGG
GAACGCTTGG CCATCGATCT GGCGGTAGAA ACCGGCATCA AGCGAATTGT CAGAGTATCG
GCAGCTGACG CCAATTTAAC CACCAAAGTG CCCTGGGCTA AAGCGCATGC AGAGGCCGAT
CATTACCTGC GCAGCAAGCC TATTGCTTGG ACCATTATTC GCCCGGTGGC GTTCATGCAA
AACTTTTTTG AGCTGGCCCG CCCGATTGCC CGGGGAATCT TACCGCACAT TACCGGTGAT
GGCCAACTTA GCTATATCGA CTCCCGGGAT ATTGCCGCTG TCGTCAGGCA ATTGCTGACC
CAGCAGGGGC ACCAGGGGGC GATTTATTAT CTAACGGGTC CAGACTCACT CAGCACAGGA
GATATTGCCA CGCGCTTAAC GGAAGCCCTG GGTCACCCGG TCAGGGCGAT TCATTTGGCA
GAAGTGGATA TGCGTGAACA GCTAAAATCA GGAGGCTTAT CGGACTGGTA CATCAACGCG
CTGATCGAGC AGTATGCCCT CGTAGCGGGC GGATATGATA TTGATACGAC CGAAGAAGTA
AAGCGCCTGA CCGGTCAGCC CCCCCGCACA TTTGCCCAGT TTGCCCGTGA CTATCACCAG
GAACTGGGGG CTGATTACCT AAGCCAAAGC AAGTGTTAA
 
Protein sequence
MVLITGATGQ IGKELCRLLA QSHIPARAMC RNQEQFTQFT QIGLEAVQGD FGQPDQLRKA 
MQGCQQLFLL TPPVPQQAQW ERLAIDLAVE TGIKRIVRVS AADANLTTKV PWAKAHAEAD
HYLRSKPIAW TIIRPVAFMQ NFFELARPIA RGILPHITGD GQLSYIDSRD IAAVVRQLLT
QQGHQGAIYY LTGPDSLSTG DIATRLTEAL GHPVRAIHLA EVDMREQLKS GGLSDWYINA
LIEQYALVAG GYDIDTTEEV KRLTGQPPRT FAQFARDYHQ ELGADYLSQS KC