Gene Slin_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3754 
Symbol 
ID8727512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4518769 
End bp4519392 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388549 
Protein GI284038619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.248863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTG CCGTTGTCGG CGCTGCGGCC GGCATTGGCC GGGAAACAGT AGCCCTGGCC 
CTGACGAAAG GGCATCATGT GTTGGCCCTG TCGCCTTCTG TGAGCACCTT AGCCGATCAT
CCGAGGCTGA CTAAAGTTAG TGGGAGTGCT ACCAACCCAG GCGATTTACA AAAAGCAATG
CATTTCGCCG ATGTTCTGCT CATCACGGTT GGCACTAAAT CCAAGAAAGG GACGACGCTC
TTTTCCGACA TCGCCAAAGC GTTAATCGTA GTGGCCCAGG AAACTGGCTA TCAAAACCCT
ATTTTAATCA TTACCGGTTT CGGAGCCGGG GATAGTGAGC CCTACTTAGG CTGGTTTATG
AAAGCGGTGA TCCACCTTTT TTTAAAGGAC CAGTACCAGG ATAAGACTCG GATGGAGGAA
CTGATTACCA GTAGTCCGTT GAACTGGGAA ATTATACGAC CGGGCATATT GACCAACCAG
GCGGATGATA AACCGTATCA GTTGTTTCCT GCGCTTCGGC GCGGCATGAA AGTAGGCAAG
ATCAGCCGCA AGGCAGTGGC GACTTATCTA ATTGATGAGG CTGAACGGAG AGATTATTTA
GGTCAACAGG TTACCCTAAC TTAG
 
Protein sequence
MTIAVVGAAA GIGRETVALA LTKGHHVLAL SPSVSTLADH PRLTKVSGSA TNPGDLQKAM 
HFADVLLITV GTKSKKGTTL FSDIAKALIV VAQETGYQNP ILIITGFGAG DSEPYLGWFM
KAVIHLFLKD QYQDKTRMEE LITSSPLNWE IIRPGILTNQ ADDKPYQLFP ALRRGMKVGK
ISRKAVATYL IDEAERRDYL GQQVTLT