| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3601 |
|---|
| Symbol | |
|---|
| ID | 8727354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4358500 |
|---|
| End bp | 4359294 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003388407 |
|---|
| Protein GI | 284038477 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.229176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCC TTTTCTTAGT TGCCGGGCTA TTGCTTTCCG GCTTTGTTCA GGCCCAGCCA
GCCCGCGAAC CGTTGTTTAC TTCGTTCGAT GGTACTAAAA TCCATTATGA CGTTGTGGGT
GCAGGAAAGC CCGTTGTTCT TCTGCATGGC TTCATCTCAA CCAGCGAAAG CTGGAAGCGG
GCCGATGTCC GGCAGGCATT AATCGACGCG GGATTCAAAG TCGTTATGCT TGATTTACGG
GGTAATGGGT TGTCCGACAA ACCCCATACC GCCGAAGCCT ATCGTGACAA TGCCGAACTA
AAGGACGTCA TAGCTTTGAT GAAATACCTT GGCCTGAAAA ACTACGATGT GGTGGGCTAC
TCGCGTGGTG CTATCCTGAC GGCTAAGCTA TTAACGATGG ATAAGCAGGT GCATAAAGCG
GTGATGGGCG GCATAAGCGT CGACTTCTCA GACCCTAACT GGTACCGTCG CAGAAACTTC
CACGAAGCCC TGACGAAACC CGGCAGCCAC CCGGAATTAC AAAGTGCCAT CGACTACGCC
AAAAAATCGG GTGCCGATAC TGTTGTGCTG GCTCGTTTAC AAGAGTTTCA GCCTGTAACA
ACCCGGACGG AGCTGGCAAA AATCAGGGTG CCCGTACTCG TGGTTAACGG CGATAAAGAT
ACCGATAACG GCGACCCGAA AACGTTGGTC GATGCGATTC CCGGCTCTCG CCTGGTCATT
GTTCCCGGCG ATCATGGCGG GGCTATGCGC ACACCGGAAT TTGCTAAAGC GGTGGTGAAT
TTTTTATCGA AGTAA
|
|---|
| Protein sequence | MNSLFLVAGL LLSGFVQAQP AREPLFTSFD GTKIHYDVVG AGKPVVLLHG FISTSESWKR
ADVRQALIDA GFKVVMLDLR GNGLSDKPHT AEAYRDNAEL KDVIALMKYL GLKNYDVVGY
SRGAILTAKL LTMDKQVHKA VMGGISVDFS DPNWYRRRNF HEALTKPGSH PELQSAIDYA
KKSGADTVVL ARLQEFQPVT TRTELAKIRV PVLVVNGDKD TDNGDPKTLV DAIPGSRLVI
VPGDHGGAMR TPEFAKAVVN FLSK
|
|---|
| |