Gene Slin_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3597 
Symbol 
ID8727350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4355692 
End bp4356357 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content52% 
IMG OID 
ProductPeptidase M23 
Protein accessionYP_003388403 
Protein GI284038473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.828772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0478878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTTC CCTTCGATTT CCAGAAAGAC CCCTACCTCA TCCTTGATTT TTCAGCGACT 
AATCCGGACC TGACTCCGGA CCCTGAACAG CCCAACGGGT TGGATCTGAC CAACACGGCG
GCTTTTTCGG ACTATGTATT CGGTAAAATG CGCGCAGCGG GCGTTCGAGT CGGCGTTGGC
GGCTATAACG AACACCGCGT TATCTACCGA CGCAGCGAGC ATTTTTCCAG CACAGAGGAA
CCCCGGGAAA TTCATCTGGG TATCGACTTC TGGGCCGAAG CCGGAACACC CGTTTTTGCT
CCTATGGATG GTACTGTTCA CAGTTTTCAG GACAATAATA ACTTTGGCGA TTACGGACCG
ACCATCATTC TGGAGCATCG TCTGGAAGCT AACGAGCCGC TGTTCTCGCT ATACGGACAC
CTTACCCGTT CATCGCTGGC CGGTTTGGTT GAAGGAAAGG CTTTTAAAGC GGGCGATAAA
ATCGGCGAAA TTGGCCCATA CCCCGAAAAT GGCGATTGGC CGCCCCACCT TCACTTCCAG
CTTATGACTG ACATGCTCGG CCTTAAAGGC GATTTCCCCG GCGTTTGTTC CCTGACAGAC
CGAGCCAAAT TTCTGGCGTT ATGTCCTAAT CCAAACCGGT TACTGAACAT TGCAGGCTTA
CCATAA
 
Protein sequence
MLLPFDFQKD PYLILDFSAT NPDLTPDPEQ PNGLDLTNTA AFSDYVFGKM RAAGVRVGVG 
GYNEHRVIYR RSEHFSSTEE PREIHLGIDF WAEAGTPVFA PMDGTVHSFQ DNNNFGDYGP
TIILEHRLEA NEPLFSLYGH LTRSSLAGLV EGKAFKAGDK IGEIGPYPEN GDWPPHLHFQ
LMTDMLGLKG DFPGVCSLTD RAKFLALCPN PNRLLNIAGL P