Gene Slin_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3585 
Symbol 
ID8727338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4330623 
End bp4331597 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388391 
Protein GI284038461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.46024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAACA AGTTTTCAAC CAAACAGTGG GCATTTGTGC TGCTACTGAT CCTCGGGATC 
GGTAGCGGCC AGGTCCGGGC GCAGCAGGAC AAGATGTTCT CGCAGTACAT GTTTAACATG
ACGGCCATTA ACCCGGCCTA TGCTGGTAGC CGGGATGTGC TGAGCATGTC CGCCCTCTAC
CGGAATCAGT GGACCGGCTT GCCGGGGGCT CCGCAAACGG CAACCTTCAC GGCCGATATG
CCCCTTAATA GTGAGCGCGT TGGCGTTGGT CTACAACTCT ATGGCGATAA AGTGGGCGTT
ATTCAGGAAA CTGGTGCGTT TGCTTCCTAC GCCTTCCGCA TAAAAGTAGG CACCAGGAGC
ACACTGGCGC TGGGCTTACA GGCGGGTGCG TCAAGCTATC AGGCCAACCT GACAGATGTA
CGAACATCGC TTGATAACCA GATTGACCCG GCTTTTGCCA CGAACATCTC CAAGATGCTG
CCGAACTTCG GTACAGGTAT TTACCTGAGC AACGACCGGT CGTACCTGAG TATATCGGTA
CCTCGCCTGA TCAAAAACAA GCTGAGCGAG TACAACGTAG GCGACTATCG GTCAGTACAG
GCCCGCCACG CGTATCTGGC TGCTGGATTC GTGGTGGGTA TCAGCCCCGT TGTAAAGATG
AAGCCATCCT TTCTGGCCAA GTATGCAGAA GGTGCCCCGC TGGGTTTCGA TGCCAACATC
AACTTCTGGT TCGCTGACCG AATCGCTATC GGTGCGTCTG TTCGACGGAA TCAGTTTTCG
ACCTGGACGA AGTACACCAC CGACGCGGTT GTTGGCCTGC TGGAAGTACA GCTGACCGAC
CAGTTTCGGT TTGGCTACGC CTATGATCGC ACGATGAGCA ACCTACAGAG TGTAGCACCA
AGTTCGCACG AGATCATGAT CCGGTACGAA CTCGGATTTG GTAAGAACCG TATCCTGACA
CCCCGCTATT TCTAA
 
Protein sequence
MSNKFSTKQW AFVLLLILGI GSGQVRAQQD KMFSQYMFNM TAINPAYAGS RDVLSMSALY 
RNQWTGLPGA PQTATFTADM PLNSERVGVG LQLYGDKVGV IQETGAFASY AFRIKVGTRS
TLALGLQAGA SSYQANLTDV RTSLDNQIDP AFATNISKML PNFGTGIYLS NDRSYLSISV
PRLIKNKLSE YNVGDYRSVQ ARHAYLAAGF VVGISPVVKM KPSFLAKYAE GAPLGFDANI
NFWFADRIAI GASVRRNQFS TWTKYTTDAV VGLLEVQLTD QFRFGYAYDR TMSNLQSVAP
SSHEIMIRYE LGFGKNRILT PRYF