| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3580 |
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| Symbol | |
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| ID | 8727333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4320543 |
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| End bp | 4323299 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003388386 |
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| Protein GI | 284038456 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0618383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTA ACACCTTTGT TCGCTATTCC TTACCCTGCT TTTTGCTCTT TCAGCTACTG
ACGACCCGCC TGTTCGCTCA GGTAAGTGTT CAGCAGTTGC TCACCGAGAA TCGCACCAAT
CCCGTTGGTT TGGATGTGAC TATTCCCCGT TTAAGCTGGC AACTCGTTAC GACCAAACGC
AATGTGCTGC AAACAGCGTA CGAGATCAGG GTGAGTACCG ATGCGGCATC GGTTGCTAAA
GGAACAAGCT GGCAATCGGG GCGGGTCGCG TCCGAACAGT CCGTCCATGT GCCTTATGGC
GGAGCTGCCC TGCAACCCAG CCAGCGGTAC TACTGGCAGG TGCGGGTTTG GGATAACACC
TCCCCAAAAC CGTCGGCCTG GAGTGCGCCC GCTTTCTGGC AAACTGGGCT GATGACTGCC
GCGAACTGGA AAGCTAAGTG GATTCAGCAG GGCTTTCCCG GCGATAGTGT TCATAGCCCC
AGCCCCCTGT TCCGGAAAGC CTTTACCGCT TCGAAGAAAG TGCGCTCGGC CGTTCTGTAC
ATGACGGCAC ATGGTATTTA CGAAGCGCAG ATTAACGGAA AGCGCGTTGG CGATGCCTGT
CTCACGCCCG GCTGGACCAG CTACAACCAG CACTTGCAGT ACCAGACCTA CGAGGTTACG
GCCCTCCTGA ATCAGGGCCG GAACGCCATT GGCGTGACCC TGGGCAGCGG CTGGTATCGC
GGACGAATGG GCTGGGCCGA TCAGAAAAAT ATATATGGCA CCCAACTGGC CTTACTCGGG
CAACTGGCCA TCACCTATAC CGACGGAAGT TCCGAAACGA TTAGTACCGA TGAGAGCTGG
AAATCCTCCA CCGGACCTAT CCGTTTCTCC GAAATCTACG ATGGGGAAGT GTACGACTCG
CGGCTTGAGA AAACGGGCTG GACCCTGCCC GCTTATGCCG ATGCCGACTG GTCGGGCGTA
AGCGTAAAGC CATTTGGCTA TGCGAACCTA GTGGCGAATT ACAACGAACT CATCCGCCGT
CATGAAACGG TGAAACCGGT GAAGGTACTT ACTACACCCA AAGGTAAAAC AGTACTCGAT
TTCGGCCAGA ATCTGGTGGG CTGGGTGCAG TTGCGCGTAA CGGGTAAAGC CGGTGATAAG
GTTGTTCTCT CGCACGTAGA AATGCTCGAT AAATTTGGCA ATCCCTACCT GGAAAATCTG
CGCACCGCCA AAGCGCAGGC GACCTATCTG CTCAAAGGTG GAACCGAAAC CTTGGAACCC
CATTTCACCT TCTTCGGCTT CCGGTATGTG CAGGTAGACG GCTTGACCGG CCCCGTTAAT
CCCGCCGATT TTACGGTCGT AACCCTGTAC TCCGACATGC CTAAAACGGG TGAATTCACC
ACATCCAACC CACTCATCAA CCAGTTACAG AGCAATATCC AGTGGGGGCA GCGGGGTAAC
TTTCTCGATG TGCCGACCGA TTGCCCGCAA CGCGACGAGC GACTGGGCTG GACCGGCGAT
GCCGAGGTGT TTTCTCGAAC GGCAGCGTTC AATTTTGGGG TGAACAGCTT CTTTACCAAA
TGGCTCAAAG ACGTTTCGGC CGATCAGTTT CCGAACGGGG CCGTGCCTTT TGTTATTCCC
GACGTACTCC GGGGGCCTAA TCCCAGTATG GCCGGAGCCG CTGGCTGGTC GGATGCCAGT
ATTATTATTC CCTGGAACAT GTACGTTGCC TATGGCGACC GGCGGCTGAT CGAGCAGCAG
TATGCCAGTA TGAAAGCCTA TCAGGGCTAT ATGGAAGGCG TTGCCAAAAA CGACCTTTGG
AGCGAAGGGT TTCAGTTTGG CGACTGGCTA TCGTTTGTCA CGACAGAAGG AAGCCCGGCC
TTTGAGGCTA AATCGGCGTT TACCGATGTG CACCTGGTGG CTCAGTGCTT CTACGCCTAC
AGTACCGACC TGATGCGGAA AACCGCTACG GTACTGGGCA AAACGGATGA TGCCGCCCAT
TACGCAGCTT TACTGGAGCG AATCAGAAAG GCGTTTCAAC AGGCATACAT GACCCCCAGC
GGCCGACTGA TTTCCGACAC ACAAACCGCT TACGTACTGG CCCTGCAATT CGACATGCTT
CCCGAAAACT TGCGTCTACA GGCAGTTGAT CACCTGGTCG ATAACGTGAA AAAATATGAA
AATCACCTGA CAACGGGCTT TCTGGGTACG CCGTTCCTGT GCCCGGTGCT GAGCCGGTTC
GGCCGTACCG ATGTGGCTTA TAAATTACTC TTGCAGGACA CGTACCCATC GTGGTTATAC
CCGGTCAAGA TGGGTGCAAC GACCATTTGG GAACGTTGGG ATTCGATGAA ACCCGATAGC
ACGTTCCAGA GCCCGTCTAT GACTTCCTTC AACCACTATG CCTACGGTGC CGTGGGCGAC
TGGATGTACC GAACCATCAC CGGCATCGAC ACCGACGAAA CCAAAACGGG GTATAAACAC
ACCATCATCA GGCCGCAGCC GGGCGGTGGC TTTACCTCAG CAGAAGCCAG TCTAAAAACC
TATTACGGCA CCGTTCGCTC GGGCTGGAAA CGCGCTTCGG ATGCGCTGAC GATGACCGTT
GAAGTCCCCG CCAATACCAG TGCCACGATT TACATACCAG CGAAAAACGC GGAGGCTGTT
CAGGAGGGAG GAAAACCACT CGGGGCATCG GGCCTGACGG CGGCCGGAAC GGAGCCCGGT
TATGTGCAGA TCAAAGTCGG TTCGGGCGTT TATACGTTTA CCAGTTCTGG TTTTTGA
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| Protein sequence | MIRNTFVRYS LPCFLLFQLL TTRLFAQVSV QQLLTENRTN PVGLDVTIPR LSWQLVTTKR
NVLQTAYEIR VSTDAASVAK GTSWQSGRVA SEQSVHVPYG GAALQPSQRY YWQVRVWDNT
SPKPSAWSAP AFWQTGLMTA ANWKAKWIQQ GFPGDSVHSP SPLFRKAFTA SKKVRSAVLY
MTAHGIYEAQ INGKRVGDAC LTPGWTSYNQ HLQYQTYEVT ALLNQGRNAI GVTLGSGWYR
GRMGWADQKN IYGTQLALLG QLAITYTDGS SETISTDESW KSSTGPIRFS EIYDGEVYDS
RLEKTGWTLP AYADADWSGV SVKPFGYANL VANYNELIRR HETVKPVKVL TTPKGKTVLD
FGQNLVGWVQ LRVTGKAGDK VVLSHVEMLD KFGNPYLENL RTAKAQATYL LKGGTETLEP
HFTFFGFRYV QVDGLTGPVN PADFTVVTLY SDMPKTGEFT TSNPLINQLQ SNIQWGQRGN
FLDVPTDCPQ RDERLGWTGD AEVFSRTAAF NFGVNSFFTK WLKDVSADQF PNGAVPFVIP
DVLRGPNPSM AGAAGWSDAS IIIPWNMYVA YGDRRLIEQQ YASMKAYQGY MEGVAKNDLW
SEGFQFGDWL SFVTTEGSPA FEAKSAFTDV HLVAQCFYAY STDLMRKTAT VLGKTDDAAH
YAALLERIRK AFQQAYMTPS GRLISDTQTA YVLALQFDML PENLRLQAVD HLVDNVKKYE
NHLTTGFLGT PFLCPVLSRF GRTDVAYKLL LQDTYPSWLY PVKMGATTIW ERWDSMKPDS
TFQSPSMTSF NHYAYGAVGD WMYRTITGID TDETKTGYKH TIIRPQPGGG FTSAEASLKT
YYGTVRSGWK RASDALTMTV EVPANTSATI YIPAKNAEAV QEGGKPLGAS GLTAAGTEPG
YVQIKVGSGV YTFTSSGF
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