Gene Slin_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3503 
Symbol 
ID8727256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4238345 
End bp4238893 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003388310 
Protein GI284038380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAA GACAATTCCT TACCTCAACA CTTGTCGCAT CAGCCTTTGC TGATCAGGCC 
ACCCCTCCTA ACCGGTTGGC CCCCCAAAAG CCTTTTACCG TTAAAGCCGG TGATGCCCGT
TCTGGCGTTC ATACGCCTTT TAAAGGGGTG AACGCCAATG ACGTAAAAGT TTCCGGCAAA
GATACCAATG GACAATTAGC TGTTTTTGAG TACATTGGCA TTGAAAAAGT GGGACCTTCC
CTGCACGTTC ACCACGAACA GGATGAGATT TTTTCCATCA TCGAAGGCGA ATACCTTTTT
CAGGTTGGCA ACGAGAAATT TACTGTAAAA GCAGGCGATA CCGTTTTCGC ACCGCGAGGT
ATACCCCACA CCTGGATTCA ACTGTCGGAG CGGGGCAAAC AGGTGTACAT GGTACAACCG
GCAGGTCAGC TGGAAGAATT CTTCCGGAAA CTAACGGAGT TGAAAGGCCC GCCCACCGAG
GAGCTGATCC AGAAAATGCA TAAGGCCCAC GGCATGACCG TACTGGGCCC AGGCCTAACG
CTGAACTAA
 
Protein sequence
MQRRQFLTST LVASAFADQA TPPNRLAPQK PFTVKAGDAR SGVHTPFKGV NANDVKVSGK 
DTNGQLAVFE YIGIEKVGPS LHVHHEQDEI FSIIEGEYLF QVGNEKFTVK AGDTVFAPRG
IPHTWIQLSE RGKQVYMVQP AGQLEEFFRK LTELKGPPTE ELIQKMHKAH GMTVLGPGLT
LN