Gene Slin_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3501 
Symbol 
ID8727254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4236664 
End bp4237218 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content55% 
IMG OID 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003388308 
Protein GI284038378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAACT CTGTTACAAA CCAACTCGCT GTGGCCTACA CCGCGCCCGG CCAGAATGCC 
AACAATGCCC CGATGCTCAA TGTGCTGGGA ATGCCCGTTG GCGTGAAAAT CAGTTATGGC
CAGACGGGCG GCACCTTCTC CTGCGTGGAG ACCCACATGG CTCCATTGCA GTTTGGCCCA
CCGCCCCACG TGCATTACGA ACTGGATGAA ATTATGCTGG TGCTGGAAGG GACCATTACG
GTGCTGGAAG GCACTGAAAC CCGCGAGATC CCAACCGGGG CTTATCATTT ACGGCCCCGG
GGCATTGTTC ATACGTTCTG GAATGCCCAC AACGCCCCGG CCCGTTTTCT GGATATGTAT
CCGAGCAATA CCCAGGACTT TGCTCATTAT CTGGAAGAAC TCTCCGACCT AGGTGGGGCC
ATTCAGGCCG AAGGCGGCAA CCCGTTTGCA CCCGAAAACA TGGCCCGGTT CAAGGCGCTG
GATGCCCGTT ATAATCATGA GGTTTTCTAT GAGCAAATGC CCGAGCACAT GGCCAAATAT
GGACCAAACG TATAA
 
Protein sequence
MSNSVTNQLA VAYTAPGQNA NNAPMLNVLG MPVGVKISYG QTGGTFSCVE THMAPLQFGP 
PPHVHYELDE IMLVLEGTIT VLEGTETREI PTGAYHLRPR GIVHTFWNAH NAPARFLDMY
PSNTQDFAHY LEELSDLGGA IQAEGGNPFA PENMARFKAL DARYNHEVFY EQMPEHMAKY
GPNV