Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3482 |
Symbol | |
ID | 8727235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4213871 |
End bp | 4214518 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | fatty acid hydroxylase |
Protein accession | YP_003388289 |
Protein GI | 284038359 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATCAA CTACTGAAAA GCTGCAAACC ATGGCCGGTC ATGGAAAAAC CCGGCCTAAA AATAGCGGTA GCAAAAAGCT ATTCGACAAT CCAATTCTAG AAGCCCTTTC GCGGACGCAC ATTATGGTCC CGATTTCGAT GTGGCTTGTT TTGTCGGCAT TTTTGGGTTG GTATGCCTTT ACTTACACCG ACATGGGTAC CAGCACGATT GCTACTCTGT TCGTTACCGG ATTGTTGGTA TTCTCCCTGT TTGAATACGT TCTGCACCGG TATTTGTACC ACCTGACGCC TTCGACTCCC CAGCGGGCCA AAATCCAGTA TACGTTTCAT GGCATCCACC ACGAATACCC AAAAGACAAG ACACGGCTGG CGATGCCCCC GGCACTGGCC ATTTTTGTAG CTGGCGGCTT CTTTGGCCTG TTCTTTCTAC TGATGGGTGA AGCGGCTTAT GCATTTTTCC CCGGTTTTCT GGTTGGCTAT TCGGGTTATC TGGCAGTTCA CTTCATCGTT CACGCCTATG CACCTCCCAA GAACTTCTTC AAGGTTTTGT GGATAAATCA CAGCGTACAC CATTACAAGA ATCCAGAAAG CAACTACGGT GTATCGTCAC CATTCTGGGA TTATGTATTT GGGTCGTTCC AGAAGTAA
|
Protein sequence | MESTTEKLQT MAGHGKTRPK NSGSKKLFDN PILEALSRTH IMVPISMWLV LSAFLGWYAF TYTDMGTSTI ATLFVTGLLV FSLFEYVLHR YLYHLTPSTP QRAKIQYTFH GIHHEYPKDK TRLAMPPALA IFVAGGFFGL FFLLMGEAAY AFFPGFLVGY SGYLAVHFIV HAYAPPKNFF KVLWINHSVH HYKNPESNYG VSSPFWDYVF GSFQK
|
| |