| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3472 |
|---|
| Symbol | |
|---|
| ID | 8727225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4204935 |
|---|
| End bp | 4205468 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003388279 |
|---|
| Protein GI | 284038349 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000238843 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT GCATCGGAAT TTTATTTACA CTGGCCGTCA TCGCTGTGGT GGGTTGTTCG
CCAAGCAGGT TATTTGTAGA GCATGATTAC AGCTACGAGG GCCATTTTAA AAATTACGAA
TCATTCAATT TTCTGGAATG CGAGTTTGTC GATTCGACAC TTCTGTGTTC CGACATTCAG
GATGCTATTC GTCACCAGAT GGAAGCACGG GGGTATCGCG TCAGCAACCG GAACCCCAAT
CTGTTAATCT CGTATAATAT ATTCCGTTCT GACCTGCGCT TCCGGGGATA CCAGCAGCCG
GTTATCAAAG ACTGGGTTGT TCGGGAAGAT GACGATGCTA CCTACAAACG TATCGACTAC
AATCTGGACG AAGGAACCCT GATGATTTCG CTCATCGATG CGGAATCCTA TCAGGTTATC
TGGAAAGGCT ATGCATCCAA AATGATGCGC AACCAGAACT TTAAGAACAA CTACTTTAAA
GGGATAGTCC GGTCAATTTT CGACCAGTAC CCGCTCATGG CTACTGCCAG ATAA
|
|---|
| Protein sequence | MKKCIGILFT LAVIAVVGCS PSRLFVEHDY SYEGHFKNYE SFNFLECEFV DSTLLCSDIQ
DAIRHQMEAR GYRVSNRNPN LLISYNIFRS DLRFRGYQQP VIKDWVVRED DDATYKRIDY
NLDEGTLMIS LIDAESYQVI WKGYASKMMR NQNFKNNYFK GIVRSIFDQY PLMATAR
|
|---|
| |