| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3461 |
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| Symbol | |
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| ID | 8727214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4194516 |
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| End bp | 4195397 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003388268 |
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| Protein GI | 284038338 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCT ATACCCGCCG AACGGCTCTG AAAACCCTGA CAGGTACTGC CCTGACATTA
CCAGTGCTGA CCGAATCTTT AGCCAGCTCT ATGACTACAA CTGAACAAAC CGCTCCGCTG
CTGAAGGGGC GCATAAACCA CTCGGTTTGC CGGTGGTGTT ATAGTAAAAT ACCGCTCGAT
GACCTCTGCA AGGCAGCCAA AGAAATGGGG ATTACCTCCA TCGACCTGAC CGGTCCTGAC
GAGTGGCCCG TGTTGAAAAA ATACGGTCTG ACCTGTGCTT TGCCACAAGG CGCTGGTAAG
GGTATCAACG ATGGTTTCAA CGACCCTAAG TTTCATGATG AACTGGTGGC CAGTTACGAG
GCAATCTTTC CAAAGCTGAA AGCCGCTGGT CTGACTACAG TTATCTGTTT TTCCGGTAAC
CGGCGGGGCA TGAGCGATGA AAAAGGTCTG GAGAATTGCG CTGTCGGGTT GAAACGCCTG
ATGCCAAGTG CTGAAAAATA CGGTATCACC ATGATTATGG AGCTACTGAA CAGCAAGGTA
AATCACAAAG ATTACATGTG CGATCATACC GCCTGGGGCG TAGAGCTTTG CAAAAAGGTT
GGCTCAGAAA ACTTTAAACT GCTGTATGAT ATCTACCACA TGCAAATCAT GGAAGGGGAC
ATCATCCGTA CAATCCGGGA GTCGAGCAAA TACATCGGGC ACTACCATAC CGGTGGTAAC
CCTGGCCGTA ACGAAATCGA CGAAACCCAG GAGCTTTACT ACCCGGCTAT CATGAAAGCA
ATTGTCGATA CCGGTTTTAA AGGCTATGTG GCGCAGGAGT TCATCCCCGT ACGCGACCCA
CTCAAAAGCC TCAAAGAAGC CGTGCTGATC TGTGATGTAT AG
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| Protein sequence | MKSYTRRTAL KTLTGTALTL PVLTESLASS MTTTEQTAPL LKGRINHSVC RWCYSKIPLD
DLCKAAKEMG ITSIDLTGPD EWPVLKKYGL TCALPQGAGK GINDGFNDPK FHDELVASYE
AIFPKLKAAG LTTVICFSGN RRGMSDEKGL ENCAVGLKRL MPSAEKYGIT MIMELLNSKV
NHKDYMCDHT AWGVELCKKV GSENFKLLYD IYHMQIMEGD IIRTIRESSK YIGHYHTGGN
PGRNEIDETQ ELYYPAIMKA IVDTGFKGYV AQEFIPVRDP LKSLKEAVLI CDV
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