Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3401 |
Symbol | |
ID | 8727154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4115846 |
End bp | 4116997 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | FAD dependent oxidoreductase TIGR03364 |
Protein accession | YP_003388208 |
Protein GI | 284038278 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.067104 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCTT CTTACGATCT GATTGTTATT GGTGCTGGTG CACTCGGCAC CTTCCATGCC TACCATGCCG CTAAAGCCGG AAAGCGTGTG CTGCTGCTTG AAAAAGATCG CTATCCGATT GGTGCCACCG TTCGCAACTT CGGGCAGGCA GTACCCTCGG GGCTGGCCGG GCGGTGGTTC GACTACGGTC GGCGGAGTCT GGAAATCTAC CGTGATATTC AGCAGCAAAC CGACATCTCC GTGCGCCAGA ACGGTACGAT CTATATAGCC TCCGATGCCG ACGAGTGGAT GCTGGCCAAT GAGCTTCATG ACCGTTATCA GCGCATTGGC TACACCAGCG AGTTGTGGAC AAAAGCGCAG TGCCTGGCAA AATACCCAAC CCTAAAGTCG GATTACGTGG TGGGTGGTAT TTATTTCCCC CAGGAGATGA GCGTTGAGCC GGAGCAGATG ATACACCGGT TAATTGCCTT CGCCCAACAG AAATACGGCG TTGATTACCG TCCCGGTTCG GTCGTTATTG ATGCCCAGTC AAATGCCAAT GGGGCTACCG TAACGCTCAG TAACCGGCAG CGGTTTCAGG CGGAGCGAGT AATTATATGC AGCGGGCACG AGGTTCGGCT GCTGTTTCCC GAGGTGCTGG CACAGGCAGG GTTGGTAGTT AGTAAACTAC AGATGCTGCT AGCCGAGCCG GTTGCTGGTC TGGCCTTGCC GGGTAATATC CTGACGGGCC TAACGATTCG CCGGTACGAA TCCTTTCAGG AGTGCCCATC GTACGAACGA GTTACGGCTA ATACGCCTGA GCACTTGACA GAACTTAAAA AGTGGGGCAT TCATATTCTA TTTAAGCAAG CCACGGATGG GTCGATCATT GTGGGCGATT CGCACGAATA CGCCGAAGCG GCCCAGGCCG AAGATCTCGG CTACCACACG CAGGACTTTA TCAATGAGCT GATGCTGGCT GAAGCCCGGC GTATTGTAAA CTTTCCGTTA ACAGTCCGTA AAACGTGGGC CGGGTTTTAC AGCCAGACCA AGGCCGAAAT ATTCGAGCAT AGCATTGACG ATAACATTCA ACTAGTGACA GGAATAGGGG GCAAGGGAAT GAGTTCAGGA GCGGGTTATG CAGAAAACAA TATTCAGCAA TGGGTAAAAT GA
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Protein sequence | MTSSYDLIVI GAGALGTFHA YHAAKAGKRV LLLEKDRYPI GATVRNFGQA VPSGLAGRWF DYGRRSLEIY RDIQQQTDIS VRQNGTIYIA SDADEWMLAN ELHDRYQRIG YTSELWTKAQ CLAKYPTLKS DYVVGGIYFP QEMSVEPEQM IHRLIAFAQQ KYGVDYRPGS VVIDAQSNAN GATVTLSNRQ RFQAERVIIC SGHEVRLLFP EVLAQAGLVV SKLQMLLAEP VAGLALPGNI LTGLTIRRYE SFQECPSYER VTANTPEHLT ELKKWGIHIL FKQATDGSII VGDSHEYAEA AQAEDLGYHT QDFINELMLA EARRIVNFPL TVRKTWAGFY SQTKAEIFEH SIDDNIQLVT GIGGKGMSSG AGYAENNIQQ WVK
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