Gene Slin_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3401 
Symbol 
ID8727154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4115846 
End bp4116997 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content53% 
IMG OID 
ProductFAD dependent oxidoreductase TIGR03364 
Protein accessionYP_003388208 
Protein GI284038278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.067104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCTT CTTACGATCT GATTGTTATT GGTGCTGGTG CACTCGGCAC CTTCCATGCC 
TACCATGCCG CTAAAGCCGG AAAGCGTGTG CTGCTGCTTG AAAAAGATCG CTATCCGATT
GGTGCCACCG TTCGCAACTT CGGGCAGGCA GTACCCTCGG GGCTGGCCGG GCGGTGGTTC
GACTACGGTC GGCGGAGTCT GGAAATCTAC CGTGATATTC AGCAGCAAAC CGACATCTCC
GTGCGCCAGA ACGGTACGAT CTATATAGCC TCCGATGCCG ACGAGTGGAT GCTGGCCAAT
GAGCTTCATG ACCGTTATCA GCGCATTGGC TACACCAGCG AGTTGTGGAC AAAAGCGCAG
TGCCTGGCAA AATACCCAAC CCTAAAGTCG GATTACGTGG TGGGTGGTAT TTATTTCCCC
CAGGAGATGA GCGTTGAGCC GGAGCAGATG ATACACCGGT TAATTGCCTT CGCCCAACAG
AAATACGGCG TTGATTACCG TCCCGGTTCG GTCGTTATTG ATGCCCAGTC AAATGCCAAT
GGGGCTACCG TAACGCTCAG TAACCGGCAG CGGTTTCAGG CGGAGCGAGT AATTATATGC
AGCGGGCACG AGGTTCGGCT GCTGTTTCCC GAGGTGCTGG CACAGGCAGG GTTGGTAGTT
AGTAAACTAC AGATGCTGCT AGCCGAGCCG GTTGCTGGTC TGGCCTTGCC GGGTAATATC
CTGACGGGCC TAACGATTCG CCGGTACGAA TCCTTTCAGG AGTGCCCATC GTACGAACGA
GTTACGGCTA ATACGCCTGA GCACTTGACA GAACTTAAAA AGTGGGGCAT TCATATTCTA
TTTAAGCAAG CCACGGATGG GTCGATCATT GTGGGCGATT CGCACGAATA CGCCGAAGCG
GCCCAGGCCG AAGATCTCGG CTACCACACG CAGGACTTTA TCAATGAGCT GATGCTGGCT
GAAGCCCGGC GTATTGTAAA CTTTCCGTTA ACAGTCCGTA AAACGTGGGC CGGGTTTTAC
AGCCAGACCA AGGCCGAAAT ATTCGAGCAT AGCATTGACG ATAACATTCA ACTAGTGACA
GGAATAGGGG GCAAGGGAAT GAGTTCAGGA GCGGGTTATG CAGAAAACAA TATTCAGCAA
TGGGTAAAAT GA
 
Protein sequence
MTSSYDLIVI GAGALGTFHA YHAAKAGKRV LLLEKDRYPI GATVRNFGQA VPSGLAGRWF 
DYGRRSLEIY RDIQQQTDIS VRQNGTIYIA SDADEWMLAN ELHDRYQRIG YTSELWTKAQ
CLAKYPTLKS DYVVGGIYFP QEMSVEPEQM IHRLIAFAQQ KYGVDYRPGS VVIDAQSNAN
GATVTLSNRQ RFQAERVIIC SGHEVRLLFP EVLAQAGLVV SKLQMLLAEP VAGLALPGNI
LTGLTIRRYE SFQECPSYER VTANTPEHLT ELKKWGIHIL FKQATDGSII VGDSHEYAEA
AQAEDLGYHT QDFINELMLA EARRIVNFPL TVRKTWAGFY SQTKAEIFEH SIDDNIQLVT
GIGGKGMSSG AGYAENNIQQ WVK