Gene Slin_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3366 
Symbol 
ID8727119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4069749 
End bp4070603 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388174 
Protein GI284038244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0726961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.142821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TTAATTTTTC ATCCGTTGCC GTAGCTTGTT TGTTTGCAAT TTCTTCATTA 
TCAGTCGCTC AGGCTCAGCT TAAAGTACCA GCGGCCAGCC CGGCCCAAAC CACCAAACAA
AGTTTCGCCC TGGGTGATAT TACACTTGAG TATTCCCGGC CGGCGGTTAA AGGGCGGGCT
ATTTTTGGGG ACCTGGTTCC TTACGACAAG GTTTGGCGGA CCGGCGCCAA CGCAACGACG
AAAATCACCT TCTCGTCGGA CGTGAAGCTG GAAGGTAAAG AGGTGAAAGC GGGTACCTAT
GGGCTGTTCA CCATTCCAGG TAAAAGCAGC TGGGAAGTAA TGCTTTCCAA AGACCTGAAT
CTGGGTGCTA ATGTGGGTGA TTACAAGAAA GAAAACGAGG TTGTTCGGGT TCAGGTGAAA
CCTACTACGC TGGCTAACAA AGTAGAAACC TTTACTATCA ATATCGCCGA TATTCTGCCC
AACTCGGCTG TGCTGGAAAT CATGTGGGAT AAAACCCGGG TTCCCGTTGC CATCACCGCA
GATATTGATC AAACGATTGT GAAGAACATC GAGGCTTCGA TGGCGTCTGA CAAGCCTGCC
TATTTTGAGG CAGCGAGTTA TTATTACGAT ACCAACCGGG ATTTGAAGCA AGCCCTCGGC
TGGGTAACCA AGGCTACGGA GCAAAATCCC AAAGCTTTTT GGGTGATGCT GCTCAAAGCC
CGCATTGAGC TGAAGCTAAA AGAGAAAGCC AATGCAATTG CCAGTGCGGA GAAAACCGTT
GCGCTCGCAA CGGAAGCCAA AAATGCGGAC TACGTAAAAA TGGCAAACGA CCTGATTGCC
TCGGCTAAAA AATAG
 
Protein sequence
MKKLNFSSVA VACLFAISSL SVAQAQLKVP AASPAQTTKQ SFALGDITLE YSRPAVKGRA 
IFGDLVPYDK VWRTGANATT KITFSSDVKL EGKEVKAGTY GLFTIPGKSS WEVMLSKDLN
LGANVGDYKK ENEVVRVQVK PTTLANKVET FTINIADILP NSAVLEIMWD KTRVPVAITA
DIDQTIVKNI EASMASDKPA YFEAASYYYD TNRDLKQALG WVTKATEQNP KAFWVMLLKA
RIELKLKEKA NAIASAEKTV ALATEAKNAD YVKMANDLIA SAKK