Gene Slin_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3353 
Symbol 
ID8727106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4058159 
End bp4058704 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID 
Productprotein of unknown function DUF1568 
Protein accessionYP_003388162 
Protein GI284038232 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.231762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG GCTATATAAT CAGAGACTCT GCCGCTACGC ATTTTCTCAC ACTGCAAGTG 
ATCGACTGGG TAGATGTATT TACCCGACGC ATTTATCGGG ATATGGTACT GGAGAGTTTG
AGCTACTGCC GTCATAAGAA AGGGTTACTG ATTTATGGCT ATGTCATAAT GAGTAATCAT
GTCCATTTAA TGGTCCAAGC TCGCGATGAG AATTTACCCG ACGTGTTACG AGACCTTAAG
AAATTCACCG CTAATCGTAT AATCAAGGAA ATTAGTAGCA GTGATACGGA AAGCCGTAGT
GACGGGATGC TCAAACGGTT TGAATTTGCG GCTCAACGTC ATGTTCGCAA CTCCGTCCAC
CAATTCTGGA CACATGAAAA CCATCCTATA GAAATTACGT CTACCAAGTT TCTGAACCAG
AAATTAAATT ATATCCATGA AAATCCAGTA CGAGCAGGCT GGGTGGAAGA ACCACAGGAA
TACCTCTATT CGAGCGCTCG TAACTACGGG GGCCGTACGG GATTGATTGA CATTGATTTG
CTATAA
 
Protein sequence
MSEGYIIRDS AATHFLTLQV IDWVDVFTRR IYRDMVLESL SYCRHKKGLL IYGYVIMSNH 
VHLMVQARDE NLPDVLRDLK KFTANRIIKE ISSSDTESRS DGMLKRFEFA AQRHVRNSVH
QFWTHENHPI EITSTKFLNQ KLNYIHENPV RAGWVEEPQE YLYSSARNYG GRTGLIDIDL
L