Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3353 |
Symbol | |
ID | 8727106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4058159 |
End bp | 4058704 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | |
Product | protein of unknown function DUF1568 |
Protein accession | YP_003388162 |
Protein GI | 284038232 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.231762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG GCTATATAAT CAGAGACTCT GCCGCTACGC ATTTTCTCAC ACTGCAAGTG ATCGACTGGG TAGATGTATT TACCCGACGC ATTTATCGGG ATATGGTACT GGAGAGTTTG AGCTACTGCC GTCATAAGAA AGGGTTACTG ATTTATGGCT ATGTCATAAT GAGTAATCAT GTCCATTTAA TGGTCCAAGC TCGCGATGAG AATTTACCCG ACGTGTTACG AGACCTTAAG AAATTCACCG CTAATCGTAT AATCAAGGAA ATTAGTAGCA GTGATACGGA AAGCCGTAGT GACGGGATGC TCAAACGGTT TGAATTTGCG GCTCAACGTC ATGTTCGCAA CTCCGTCCAC CAATTCTGGA CACATGAAAA CCATCCTATA GAAATTACGT CTACCAAGTT TCTGAACCAG AAATTAAATT ATATCCATGA AAATCCAGTA CGAGCAGGCT GGGTGGAAGA ACCACAGGAA TACCTCTATT CGAGCGCTCG TAACTACGGG GGCCGTACGG GATTGATTGA CATTGATTTG CTATAA
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Protein sequence | MSEGYIIRDS AATHFLTLQV IDWVDVFTRR IYRDMVLESL SYCRHKKGLL IYGYVIMSNH VHLMVQARDE NLPDVLRDLK KFTANRIIKE ISSSDTESRS DGMLKRFEFA AQRHVRNSVH QFWTHENHPI EITSTKFLNQ KLNYIHENPV RAGWVEEPQE YLYSSARNYG GRTGLIDIDL L
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