Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3342 |
Symbol | |
ID | 8727095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4040943 |
End bp | 4041641 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388151 |
Protein GI | 284038221 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.42707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.162621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TACTATTCCT AGTACTACTA AGCGCCATTA TCCGGCCAGC TATTGCGCAG AAAATCATCG AGAAAACGCT ACCGGTATCC GGGAATCAAC TGGTGAACCT CAACCTGAAA TTTGCGGATA GCATTCAGGT TCGGTATTGG GATAAGCCGA ATGCAGCCGT CCGGATCTCG GTTACCATTA ACGGAGGCAA GCTAAATGAT GCTCTGGTCG TAACTACAGG CGCTACGGCA CAGGAAGCCA GTCTTAAAAC CGATTTTGAT CAAGAGATGA TCAAACAGGG AAAAGAAGAA GACTGCCCTG GCCAGCGACA TTCCTGGAAC TCAGACCGAA ACGGAAACCG GTACTCGGTG TGCAGCGAAA TTAACTATCA GGTGTTTCTG CCCCGGCAGG CGCAACTCAA AATTGAAACC ATTAGTGGTA ATATTGACAT TCAGGGAGCG ACAGGGCCCG TATTCGCGAA GACAATCAGC GGTTTTGTCG ATATGAACTG GCCCAAAGCT AAAGGAGCAA ACATAGCCAT GCAAACCATT ACGGGTGAAG TTTATTCGGA CCTCAACATC GACTTCAGGA ATAAAAAACA GAAAAATCCG ATTGTAGGCT ATCTGCTGGA GGGAACGGTG AACGGCGGAG GCCCCAGTGT CCGGCTGGAA TCCATCAGCA ATAATGTGTA TCTGCGACAG AAAGACTGA
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Protein sequence | MKKLLFLVLL SAIIRPAIAQ KIIEKTLPVS GNQLVNLNLK FADSIQVRYW DKPNAAVRIS VTINGGKLND ALVVTTGATA QEASLKTDFD QEMIKQGKEE DCPGQRHSWN SDRNGNRYSV CSEINYQVFL PRQAQLKIET ISGNIDIQGA TGPVFAKTIS GFVDMNWPKA KGANIAMQTI TGEVYSDLNI DFRNKKQKNP IVGYLLEGTV NGGGPSVRLE SISNNVYLRQ KD
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