Gene Slin_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3342 
Symbol 
ID8727095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4040943 
End bp4041641 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388151 
Protein GI284038221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.42707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.162621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TACTATTCCT AGTACTACTA AGCGCCATTA TCCGGCCAGC TATTGCGCAG 
AAAATCATCG AGAAAACGCT ACCGGTATCC GGGAATCAAC TGGTGAACCT CAACCTGAAA
TTTGCGGATA GCATTCAGGT TCGGTATTGG GATAAGCCGA ATGCAGCCGT CCGGATCTCG
GTTACCATTA ACGGAGGCAA GCTAAATGAT GCTCTGGTCG TAACTACAGG CGCTACGGCA
CAGGAAGCCA GTCTTAAAAC CGATTTTGAT CAAGAGATGA TCAAACAGGG AAAAGAAGAA
GACTGCCCTG GCCAGCGACA TTCCTGGAAC TCAGACCGAA ACGGAAACCG GTACTCGGTG
TGCAGCGAAA TTAACTATCA GGTGTTTCTG CCCCGGCAGG CGCAACTCAA AATTGAAACC
ATTAGTGGTA ATATTGACAT TCAGGGAGCG ACAGGGCCCG TATTCGCGAA GACAATCAGC
GGTTTTGTCG ATATGAACTG GCCCAAAGCT AAAGGAGCAA ACATAGCCAT GCAAACCATT
ACGGGTGAAG TTTATTCGGA CCTCAACATC GACTTCAGGA ATAAAAAACA GAAAAATCCG
ATTGTAGGCT ATCTGCTGGA GGGAACGGTG AACGGCGGAG GCCCCAGTGT CCGGCTGGAA
TCCATCAGCA ATAATGTGTA TCTGCGACAG AAAGACTGA
 
Protein sequence
MKKLLFLVLL SAIIRPAIAQ KIIEKTLPVS GNQLVNLNLK FADSIQVRYW DKPNAAVRIS 
VTINGGKLND ALVVTTGATA QEASLKTDFD QEMIKQGKEE DCPGQRHSWN SDRNGNRYSV
CSEINYQVFL PRQAQLKIET ISGNIDIQGA TGPVFAKTIS GFVDMNWPKA KGANIAMQTI
TGEVYSDLNI DFRNKKQKNP IVGYLLEGTV NGGGPSVRLE SISNNVYLRQ KD