Gene Slin_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3341 
Symbol 
ID8727094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4040142 
End bp4040921 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388150 
Protein GI284038220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.163911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.171376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA TTCTTTTGCT TAGTGTATAC CTATTGTGGA GTTTTACTAC CCTTCAGGCC 
CAGGAATACA AGACGAAACT GACAAACGCT AAAGACCGAA AAATAACCAT CGAGATGGAT
GCCACGTCAC TCAAGATTGA AGGGCATAAT AGCGACGACA TACTTATTCA GGCATCATCC
GGTTATGAAG CTCCACCCGA GCGAGCCAAA GGGCTGAAAC CGATCTATAA CACAGCGGTA
GATAATTCGG GTATAGGTTT GGCCGTCACA ACGGAAAACG GCGGGTTAAA AATTGAAAAG
GCAACCCGGA AGCCGATAAA GTATACCATG AAGCTACCCC GTAAAGTGGC CCTACTATAC
CAGGAAACGA ACTGGCAGGG CTCCCTCATA AGCATAAGCA ATATGGACGG CGACCTGGAG
ATAAAAACCA ATAATGCGTC TATCGACCTT ACTAATGTGA CGGGGCCAGT TGTAGCCAAT
ACGATCAACG GCGAAGTTAA AGTGGTTTAT TCGACACTAA GCCAGGGGAA GCCAACGGCG
ATTTCTACAA TCAATGGGCC GGTCGATATT ACCCTCCCTG CCAATGCCAA AGCAAATCTG
AAACTTCGGT CGATAAACGG TGAGATGTAT ACTGATTTTG ACCTGGGCGT GAAAACATCG
AAAGATGGCA TGTCGAAAGT TGGCGGTGGT CATGATATCG ACGGCACTAC AAACGGCGGG
GGCGTTGAGA TGCAACTCAA GACGATCACG AGTAATATCT ATATCCGAAA ACAAAAGTGA
 
Protein sequence
MKTILLLSVY LLWSFTTLQA QEYKTKLTNA KDRKITIEMD ATSLKIEGHN SDDILIQASS 
GYEAPPERAK GLKPIYNTAV DNSGIGLAVT TENGGLKIEK ATRKPIKYTM KLPRKVALLY
QETNWQGSLI SISNMDGDLE IKTNNASIDL TNVTGPVVAN TINGEVKVVY STLSQGKPTA
ISTINGPVDI TLPANAKANL KLRSINGEMY TDFDLGVKTS KDGMSKVGGG HDIDGTTNGG
GVEMQLKTIT SNIYIRKQK