Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3341 |
Symbol | |
ID | 8727094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4040142 |
End bp | 4040921 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388150 |
Protein GI | 284038220 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.163911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.171376 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTA TTCTTTTGCT TAGTGTATAC CTATTGTGGA GTTTTACTAC CCTTCAGGCC CAGGAATACA AGACGAAACT GACAAACGCT AAAGACCGAA AAATAACCAT CGAGATGGAT GCCACGTCAC TCAAGATTGA AGGGCATAAT AGCGACGACA TACTTATTCA GGCATCATCC GGTTATGAAG CTCCACCCGA GCGAGCCAAA GGGCTGAAAC CGATCTATAA CACAGCGGTA GATAATTCGG GTATAGGTTT GGCCGTCACA ACGGAAAACG GCGGGTTAAA AATTGAAAAG GCAACCCGGA AGCCGATAAA GTATACCATG AAGCTACCCC GTAAAGTGGC CCTACTATAC CAGGAAACGA ACTGGCAGGG CTCCCTCATA AGCATAAGCA ATATGGACGG CGACCTGGAG ATAAAAACCA ATAATGCGTC TATCGACCTT ACTAATGTGA CGGGGCCAGT TGTAGCCAAT ACGATCAACG GCGAAGTTAA AGTGGTTTAT TCGACACTAA GCCAGGGGAA GCCAACGGCG ATTTCTACAA TCAATGGGCC GGTCGATATT ACCCTCCCTG CCAATGCCAA AGCAAATCTG AAACTTCGGT CGATAAACGG TGAGATGTAT ACTGATTTTG ACCTGGGCGT GAAAACATCG AAAGATGGCA TGTCGAAAGT TGGCGGTGGT CATGATATCG ACGGCACTAC AAACGGCGGG GGCGTTGAGA TGCAACTCAA GACGATCACG AGTAATATCT ATATCCGAAA ACAAAAGTGA
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Protein sequence | MKTILLLSVY LLWSFTTLQA QEYKTKLTNA KDRKITIEMD ATSLKIEGHN SDDILIQASS GYEAPPERAK GLKPIYNTAV DNSGIGLAVT TENGGLKIEK ATRKPIKYTM KLPRKVALLY QETNWQGSLI SISNMDGDLE IKTNNASIDL TNVTGPVVAN TINGEVKVVY STLSQGKPTA ISTINGPVDI TLPANAKANL KLRSINGEMY TDFDLGVKTS KDGMSKVGGG HDIDGTTNGG GVEMQLKTIT SNIYIRKQK
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