Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3333 |
Symbol | |
ID | 8727086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4030974 |
End bp | 4032155 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | Cystathionine gamma-synthase |
Protein accession | YP_003388142 |
Protein GI | 284038212 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTT CGAACTACGA AAAAAGTACA GCCTCTGTCT GGGCGGGCGA AACCGACGTG TTACCCAACG GTGCAGTCAC CACGCCCATC GTAAAAAGTG TTGCCTTCGC TTACACCGAT CTGGACGAAT GGCACGAAGT AGCCCTGGGT AAAGCCGAGG GTTTTATCTA CAGCCGAAAC ACCAACCCAA CCGTACACGT ACTCGAAGAA AAAATCCGGA TTCTGGAAGG TGCCGAAGCC GCCACGGCCT TTGCCACCGG TATGGGTGCC ATCAGCAACA CCCTGTTTGC GCTACTGGGG CCCGGCAAAC GGGTGGTTTC TCTGAAAGAT ACATACGGCG GAACCAGCCG TTTATTTCTG GATTTCCTAC CCCGCTACCA GGTAAACGTA ACCCTTTGCG ACACTACCGA CTTCGACCAG ATTGAAGCCG AAGTAGCCAA AGGCTGCGAC GTTCTGTATC TCGAAACGCC TACTAACCCT ACTCTCAAAG TGGTGGACCT CGCCCGACTA GCCGCAGCCG CCAAAAAAGT GGGAGCCGTT ACGGTGGTCG ATAATACCTT CGCGACACCC ATCAACCAGA ATCCGCTGGC CCTGGGTGCC GACCTCGTGC TGCACAGTGC GACCAAGTTC CTGGGTGGTC ACTCCGATGC TATGGGGGGC GTGCTATGCG GCAGTAAAGA ACTGGTCAGC AAGGTGTTCC AGTTTCGCGA AATAAACGGA GCCAGCATTC AGGCCGATGC CGCTTATATG ATTGCCCGAG GGATGAAAAC GCTCGAACTG CGTATCGAAC GGCAAAACGC GTCGGCCCTA ACCATTGCGC GGTATCTGAA AGCCCATCCT AAAGTCAGCG ACGTCTTTTA TCCGGGACTT GAAACGCACC CCGGCCATGA GATTGCCAAA TCGCAGATGT CGGGGTTTGG GGGTATTATG AGTTTCTCGC TGAACGGCGG CTATGAACAA GTCAAAACGT TTTTACCGAA GCTCCGGTTT GTGCATCTGG CCGCCAGCCT GGGTTCGGTG AGCACGCTGG CCGGACCACC CCGAACCACC AGCCACGTCG AACTAACCGA GGACCAGCGC AGGCAGTTGG GCATTCCAGA AAGCCTGATC CGGTACTCAG TCGGCATTGA GAATGTAAAT GATTTGCTAG CCGATCTGGA ACAGGCATTG GCTGCTTTGT AA
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Protein sequence | MDFSNYEKST ASVWAGETDV LPNGAVTTPI VKSVAFAYTD LDEWHEVALG KAEGFIYSRN TNPTVHVLEE KIRILEGAEA ATAFATGMGA ISNTLFALLG PGKRVVSLKD TYGGTSRLFL DFLPRYQVNV TLCDTTDFDQ IEAEVAKGCD VLYLETPTNP TLKVVDLARL AAAAKKVGAV TVVDNTFATP INQNPLALGA DLVLHSATKF LGGHSDAMGG VLCGSKELVS KVFQFREING ASIQADAAYM IARGMKTLEL RIERQNASAL TIARYLKAHP KVSDVFYPGL ETHPGHEIAK SQMSGFGGIM SFSLNGGYEQ VKTFLPKLRF VHLAASLGSV STLAGPPRTT SHVELTEDQR RQLGIPESLI RYSVGIENVN DLLADLEQAL AAL
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