Gene Slin_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3323 
Symbol 
ID8727076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4020681 
End bp4021622 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content52% 
IMG OID 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_003388133 
Protein GI284038203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0601225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCAC CTACACTACC TGACACCTCC ATGCCGAGGA TTTTTAACAT GTTCATTATT 
CGCCTGCTCT GGCAAATTCC AACAGGACTT TTTCTTGTCG TTGTTCTCTT CTTGTCTATC
AACGAATATG CTGCCGCCCG GCCCAGTCGG CGCATAAAAG ATATTCCTTA TGTAGCCACA
AATGCTTCCG GCACCGATGC AGAGCGGCAT TTGCTGGATG TGTACACGCC CCGAAAAGCA
ACGTCTGCGG GCAAAATGCC GGTGGTCATG TTCATTCACG GGGGGAGCTG GAATAGCGGC
AGTAAAAATC TGTACACGTT TATCGGGCGT CGACTGGCGA AACAGGGTGT TGTGGCGGTG
ATTATCAACT ACCGGCTCTC GCCCGCTGTG CTGGTGCCTG CCATGGCCGA CGATTGTGCG
GAGGCTGTTC GCTGGACTAC GCAACACATC GCCGAATACG GTGGAGATCC TGACCGTATT
TTCGTGATGG GCCACTCGGC GGGTGCGGGA CTGGCCGCCC TGCTGGCTAC CGACAGTCGG
TTATTTGCTA AGCTGGGTAT AACCAAAAAT CCTGTGAAGG GGGCCATTCT TGATGATCCC
GCCGGACTGG ATATGTTCGA TTACCTCACC AGAATGGAGT ATCCGAATGA TGAGCAGTAC
CTGATTTCCT ATGGGAAAGA CCCGGCTGTC TGGCGTAGCG TGTCGCCCAT GTATTTTGTC
AGCGATGCCA CACCGCATAT GCTGCTGTAT ACCGGTGGCC GTACCTACCC GAGCATTACG
AGCAGTTCCC AACGTTTTAT CGAACGGCTG AAAGAGCATA ACGTGAAATA CGACTATAAG
GTATTACCGG GGAAGAAACA CGTTGCTATG GTGACGCAAC TGTTCTGGCA GCACAATCTT
ATTTATCAGG AACTGCTGAC GTTTGTAGGC GCTGATAAAT GA
 
Protein sequence
MFAPTLPDTS MPRIFNMFII RLLWQIPTGL FLVVVLFLSI NEYAAARPSR RIKDIPYVAT 
NASGTDAERH LLDVYTPRKA TSAGKMPVVM FIHGGSWNSG SKNLYTFIGR RLAKQGVVAV
IINYRLSPAV LVPAMADDCA EAVRWTTQHI AEYGGDPDRI FVMGHSAGAG LAALLATDSR
LFAKLGITKN PVKGAILDDP AGLDMFDYLT RMEYPNDEQY LISYGKDPAV WRSVSPMYFV
SDATPHMLLY TGGRTYPSIT SSSQRFIERL KEHNVKYDYK VLPGKKHVAM VTQLFWQHNL
IYQELLTFVG ADK