Gene Slin_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3300 
Symbol 
ID8727053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3990398 
End bp3991213 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content50% 
IMG OID 
Productdimethyladenosine transferase 
Protein accessionYP_003388110 
Protein GI284038180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000380546 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTTA AACCTAAAAA AGAACTCGGT CAGCACTTTT TAAAAGACCT GAGCATTGCT 
CAACGCATTG CCGAACTCCT GACCGGTCAC GCCGGAGCGG ATGGCGTGCC GTATACCAAA
GTGCTGGAAA TAGGTCCGGG TACGGGTGTG CTAACCCAGT TTCTTCTACA GAATAGCCAG
TTTGATACGT ATGTCATTGA AATTGACCGC GAATCGGTCG AGTACCTGAA ACAGTATGTA
CCAGCCCTGG AAGGCCGTAT TCTGGCATCC GATTTTCTTA ATATCCGCCC GGATCTACTG
CCGACCAAAC AACCTGATAA TACGGAGCCT TTTGCTGTTA TTGGCAATTT TCCTTATAAT
ATTTCAACCC AGATACTCTT TAAAGTACTG GACATGCGCG ACCGGGTTCC GGAGGTAGTA
GGCATGTTTC AGCGCGAGGT AGCGCAGCGG GTAGCCTCCG GGCCGGGCAA TAAAGATTAT
GGTATTTTGA GCGTCTTGCT ACAGGCCTGG TACGATATCA AGTACGAGTT TACCGTAGAC
CCAAGCGTCT TCAACCCGCC CCCCAAGGTC TTTTCGGGGG TAATTTCGCT TAAACGGAAT
GCCGTTACCG ACTTGGGTTG CGACGTAAAG AAGTTTACGC AGGTTGTTAA GCACGGGTTC
AGCCAGCGCC GAAAAACACT CCGGAACGCC CTTAAACCCC TGTCTCCATC CGAAGCTGCC
CTTGCCAGCC CGTTCATGGA TAAACGGGCT GAACAGCTGG GTGTAGCTGA GTTTGTAGCC
TTAACTATAT TAATGAGCGA AAGAGCGGAA GGATAA
 
Protein sequence
MYVKPKKELG QHFLKDLSIA QRIAELLTGH AGADGVPYTK VLEIGPGTGV LTQFLLQNSQ 
FDTYVIEIDR ESVEYLKQYV PALEGRILAS DFLNIRPDLL PTKQPDNTEP FAVIGNFPYN
ISTQILFKVL DMRDRVPEVV GMFQREVAQR VASGPGNKDY GILSVLLQAW YDIKYEFTVD
PSVFNPPPKV FSGVISLKRN AVTDLGCDVK KFTQVVKHGF SQRRKTLRNA LKPLSPSEAA
LASPFMDKRA EQLGVAEFVA LTILMSERAE G