Gene Slin_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3295 
Symbol 
ID8727048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3980636 
End bp3985960 
Gene Length5325 bp 
Protein Length1774 aa 
Translation table11 
GC content42% 
IMG OID 
Productmulti-sensor signal transduction multi-kinase 
Protein accessionYP_003388105 
Protein GI284038175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGCG AAGATAATGT ACCTGGATAT AAGATTAATG AAGTTGTTCA TGAAGGAAAA 
CGTGCGCTAA TTTATCGAGC TGTAAGAAAT ACAGATAAAA AAAACGTACT TCTAAAGACG
TTGGTAAATC CCTATCCCAG CGCAACTGAA ATTGCTTATT TAAAAAAGGA ATACGCATTA
TTAAATGACA TCAATGTAGA TGGAGTCAGC AAAGTATACG ACTTACTAAC TCACAAAAAT
AGGCTGGTTA TCGTACTGGA CGATTGTAAT GGGCAGTCTT TGGCCAGCTA TTTAAAATCA
ACCCGATTGG GCCTTACGGA GTTTTTGGAT ATCGCTATCC GAATCACCAC TGTTTTGGGC
GATCTACATG CATTGGACAT AGTTCATAAG GATATCAATC CTGAAAATAT TATTATCAAC
GTTCATACAA GAGAAGTTGT TTTAGTTGAT TTCAGGATAG CTACAAAATT ATCATCTGAA
CGTACATCGG CTCGTAATCC ACACGTACTG GAGGGTACTT TACCATATAT ATCTCCGGAA
CAAACGGGAC GCATGAATCG CTCTACAGAT TATCGAGCTG ATTTTTATTC ATTAGGTATA
ACTTTTTACG AAATGTTGCT TGGCTTTCTG CCTTTTTTCA GCGAGGAGCC AATGGAATTA
ATTCACTATC ATTTAGCTAA AAATAGTATT CCGCCGGTCG AACTGGATGC AAAAATACCA
GGTGTCGTAT CCGATATTGT GTTGAAATTG ACGGAGAAAA ATGCTGAAAA TAGGTACCAG
AGTGCAAGTG GTCTGAAATA CGATCTTGAG AAGTGTTTAC TGTATCTGAA GAATGGATCA
AATATTCCTC ATTTTGTAAT TGCTGAAAAA GATATTTATT CTAAATTTAA TATACCTGAA
AAACTATACG GACGAGATCA TGATATTGCG AGATTAATGT ATCTCTTTAC GGAGGTTTCT
ACCGGAGGAT GTAGACTTGC CCTGATCAGT GGAGCGTCGG GCGTTGGGAA GACTGCTCTG
GTTAACGAAA TTCACAAGCC AACTGCAAAG AGAAATGGCT ATTTTGTTTC AGGTAAATTT
GATCAATTCA AAGCTAACTC TCCCTTTAGT GCATTCTCCC TTGCGTTTTC CGAACTTGTA
AAAGACCTGG TAAGTGAACC CAGCGATAAG CTGAAAAAGA TTAAAGCTGA ACTGATTAGT
GTGCTGGGAT TAAACGCCCC CGTATTAGTC GACCTGGTGC CTGAATTTGA GTATATTATA
GGTAAGCAAG GTCCGGCGCA GCCATTAAAT CCGGCCGAAT CTAAAAACCG TTTCTTCTTT
ACGCTGCGTG AATTTATTCG CGTCTTTGCT ACGCAGGAGC ACCCATTGAC TATTTTCCTG
GACGATCTTC AATGGGGCGA TGATTCATCA TTTCGCCTGA TTACTGACCT TATCAGTACA
GATATCCCCT ATTTATTCAT CATTGGTGCC TATCGTGATA ATGAGATAGG TCCAGGCCAT
CCCTTACGGC TTACAATCGA TAAGGTAAAA AAAACAAAGG AAGTAGATGA ACTGATCTTA
TCTGATCTGG AAGAAGTTCA TGTTAATCAG TTAGTTGCCG ATACGTTAAA AGTTACTCAG
GAAGAAACAA AAACCCTGGC CACAATAATT TATAAACGAA CGGTCGGAAA CCCATTTTAT
CTGTACGAAT TATTTAAAAC AACACATTCG CAGGGATTGG TTTTTTTTGA TCACTTAAGT
GGAAAATGGA CGTGGAATAT AAAAAAAATA GCAGCGTATA ATATATCCAA TAATGTAGTT
GATTTTATGG CGGCTAAATT AAGCGAGTTG CCTGACGAAT GTCGAAAATT GTTAGAACTT
GCTGCCTGTA TTGGAAATAC TTTTTCGCTG AAAACGCTTA GTCTACTTAT AAAAAAGAAT
GCCTTTGATA CATCAGTTAT TCTGTGGCCT GCACTTGAAG AAGAAATTAT TATACAGACA
AGCCAAGCTT ACCGATTGGT TACAGGCGAT GACGATTTTG GCGTTTCATA CAAGTTTCAG
CATGACCGTA TTCAGCAAAG TGTTTATCAG AATATAGCCG AAGACACAAA GAAACTGCTA
CATCTCACCA TCGGTAAACT GCTGTTGGAG ACCATGTCTG ACTCAGAAAA AAGTGAGCTT
GTCATAGAGG TAGTCAGGCA CTTTAATGAA AGCAGTGACT TACTCGATGA AGAGGCCGAT
CGGATTGATC TGGCGCAAAT GAACTTACAG GCTGGACGAA GAGCTCAATC AGCTGTGGCG
TACAGTTCGG CCCTCGATTA CTTTAAAAAA GGTATTGATT TAATGCCTGA TTCGCTTTGG
GAGTCATATC ATCAGCTAGC CTTTGATTTA TATGCCGGAT ATGCACAGAA TGCGTATCAA
ACAAACGATT ATTTTAGCGC TGAGACATCT ATAAATCGTT TACTCGAAAA GGCCCGTACC
AAGCTGGAAA AAGTAGAGAT ACTGTCGTTC AGAATACGTC AGTATAATAC CGTAGGAAAA
TCAGAAGAAG CCATTCGGGC CGGTATAGAA GGGCTTGCCT TGTTAGGATA CGATTTACCT
GAAAAACCAG CTGCAGCATT AGTCTTAAAA GAAGTTATCC TTGCTAAATG GCGACTTGGC
AACCGAAAGC CTACCGCACT GCTGGATGCG CCAATCCTGC GTGACCCGGA AAAAAAAGCA
GTAGCGCGGT TATTAACCGA AATTGGGCCA TCAGCTTTTG TGTTAGGGAA TGACAGTTTA
TATGGCTTAA CGCAGCTTAA AATCGTAAAC CTTTCCATGC AGTATGGAAA CTGTGAGGAA
TCGGCCTATG CGTATGTCGC GTTTGGTGCT GTTTTATCGG AAGCGTTTGG GGACCTGAAA
TCAGCAGAGA GCTTCGGCCA GCTTGGTCTG GCTCTCAACG AAAAACTGGG GGATATTGAG
TACCGATGCC GGGTAATAGC GGCTTACGGG GTGTTAACGC ATCACTTTAA TAATCACTGG
AATACAACGG GTGACTTTTT CAAAAAAGGT ATAGAAGCCG GGTACCTTTC CGGCGACTTA
TTTTATTTAG CTTACTGCGC TACGAATTGT ACCGTTTGGC AACCGTCTCT TGATCTTCCT
TCATCACTGG CCGACCAGAA AAAGTATTTT AAGGTTGTTC TGGATACCGA TTATACGGAC
GCAATTGATT CGGCAAACAT GAATATGCAA TTGACGAAGA ATTTCATGGG CCTGACCGAA
GGTTTATACG TTTTGGATGA TGCTGAATTT AATGAAGTTC GTTGTCTGAA GCAGATGACA
CAACGGAAAT ATTCGTCGGG CATTGGAATG TATCATATTC ATAAAGCTTA CATCTATCTG
TTCTATGGTC AGCATAAAAA GTCTTATGAA TCAGTGAAAC AGGCCGATCA ATATGTTAAA
TCGCTCGTCA GTCTTATTAA TTTAACTCGA CTTTGTATCG TCTCTTTCTT TGCCTCATCT
GGCTATCTCT TGTTTGGTAT TGATCCTCCG AGAGATCAGC TGAAAAAGCG AATGAAAAAA
GAGCTTGCTA AAATGAAAAG GTGGGCAGCT TATAACCCGA CTAATTTTCT TCATATGCAG
CACCTTATGG AAGCTGAGAT TGCCAACATT GACGACGATT TTGTAGGTGC TACTAAACTT
TATGAAAAAG CCATTCGATT GGCGGGTGAA AATGCCTGGC AGGCCGATGA AGCGTTTGCC
AATGAACTAG CCGCAAAATT TTTTAGTCGG CACGGAATCG ATACGGCTTC GTCCGGGTAT
TGGAAAGACG CCTATTATTT GTACAATAAA TGGGGAGCTC AGGGTAAAAT TAAGCTTTTG
CGGGAGGCCT ATCCACAGTT ATTCAAGACA GTTAGGAGTA GTGCCGCTGA GCGTGTTAGC
GACTTAAGCG GGGGCGAGGA GCGCGAAACC ATTTATGCAT TGGATGTCGA TACAATCGTA
AAATCATCAC AGGCTATTTC GGGCGAGATA GAGTTGAAGT CTCTCGTTAT CAAAATGATG
AACATCATCA TGATGAATGC AGGGGCTGAA AATGGGATGC TTTTATTGAA GCAGGATGAT
CGGATACTCA TTCAGGCTTC AGCTTCGGCC GATGAAGTTA AAACGATGCA AAACATACCT
GCTGAAGACA GCAGACAACT TCCGCAAACA ATTATAAACT ACGTATCTCA TTTGCAGGAG
TCGGTGGTCC TTTATGATGC AGCAAACCAG GGTAAGTTCA GAAACGATGA TTATATTCTA
AGGAACCAGA CTAAGTCGAT TCTGTGCAGT CCGATTGTAT TTCTGAATAA ATTATACGGA
ATAGTATACC TGGAAAATAA CATTTCTGTG GGTGCTTTTA CCGAAGAGCG ATTGAAAATA
GTACGGCTAT TGTCATCACA AATGGCCATA TCCATTCAAA ACGCCATTTT GTATTCGAAT
CTGGAAAATA AAGTGCAGGA GCGTACAGTT GAGATACAGG CACAACGGGA CCAGACTCAG
CAGGCTCTGA CGGAGTTAAA AGCAACGCAG GCCCGCCTGA TCCAGAAGGA AAAGATGGCT
TCTTTGGGTG AGTTGACGGC AGGCATTGCC CACGAGATAC AGAACCCCCT CAACTTCGTA
AATAATTTCG CTGAAATAAG TTCTGAGATT GTTGATGATC TGGTGCTGGA ACACAGCAAA
CCAACCCGAA CCGCTAAGCT GGAGTCGGAT TTATTAACGT TCCTGAAAGA CAATCTCACC
AAAATTCACC ATCACGGGCA GCGGGTTTCG AATATTGTTA AAGGTATGCT CGAACACTCC
CGTATTGGTA GTGGCGAGAT GCAGCCAACT AATCTGGGTG CGTTGGCTGA TGAGTATCTA
TATCTGGCTT ATAACGGATT GAAGTCTAAG GATAAAACGT TTAGCTGCGA GTTGGTCACG
TATTACGACC CGGCAGTTTA CACGGTTAAT GTTGTATCGC AGGACATTAG CCGGGTATTT
TTAAACCTGT TTAGCAACGC TTTCTATGCG GTTAGGGAGC GGAAACAGCA GCAGGGCGAT
GCTTACCAGC CTTTTGTCCG TGTGCATGTC AGGCAGTCGA AGGGCTTTGT TGAGATTTTG
ATTGCTGATA ACGGTATTGG CATGTCTCAG GCTGTACAGG AGAAGATTTT CCAGCCATTT
TTTACGACGA AACCCACTGG TGAAGGAACC GGTCTTGGGC TCTCCCTTAG TTACGATATT
ATAACCAAGG GGCATCGCGG GGGGCTATTC GTGCAAAGCT GGGAAGGTGA GGGAACGGAG
TTTACTATTC AATTGCCTGT TTCAGAGGAA AATGTTGTCG CGTAA
 
Protein sequence
MIREDNVPGY KINEVVHEGK RALIYRAVRN TDKKNVLLKT LVNPYPSATE IAYLKKEYAL 
LNDINVDGVS KVYDLLTHKN RLVIVLDDCN GQSLASYLKS TRLGLTEFLD IAIRITTVLG
DLHALDIVHK DINPENIIIN VHTREVVLVD FRIATKLSSE RTSARNPHVL EGTLPYISPE
QTGRMNRSTD YRADFYSLGI TFYEMLLGFL PFFSEEPMEL IHYHLAKNSI PPVELDAKIP
GVVSDIVLKL TEKNAENRYQ SASGLKYDLE KCLLYLKNGS NIPHFVIAEK DIYSKFNIPE
KLYGRDHDIA RLMYLFTEVS TGGCRLALIS GASGVGKTAL VNEIHKPTAK RNGYFVSGKF
DQFKANSPFS AFSLAFSELV KDLVSEPSDK LKKIKAELIS VLGLNAPVLV DLVPEFEYII
GKQGPAQPLN PAESKNRFFF TLREFIRVFA TQEHPLTIFL DDLQWGDDSS FRLITDLIST
DIPYLFIIGA YRDNEIGPGH PLRLTIDKVK KTKEVDELIL SDLEEVHVNQ LVADTLKVTQ
EETKTLATII YKRTVGNPFY LYELFKTTHS QGLVFFDHLS GKWTWNIKKI AAYNISNNVV
DFMAAKLSEL PDECRKLLEL AACIGNTFSL KTLSLLIKKN AFDTSVILWP ALEEEIIIQT
SQAYRLVTGD DDFGVSYKFQ HDRIQQSVYQ NIAEDTKKLL HLTIGKLLLE TMSDSEKSEL
VIEVVRHFNE SSDLLDEEAD RIDLAQMNLQ AGRRAQSAVA YSSALDYFKK GIDLMPDSLW
ESYHQLAFDL YAGYAQNAYQ TNDYFSAETS INRLLEKART KLEKVEILSF RIRQYNTVGK
SEEAIRAGIE GLALLGYDLP EKPAAALVLK EVILAKWRLG NRKPTALLDA PILRDPEKKA
VARLLTEIGP SAFVLGNDSL YGLTQLKIVN LSMQYGNCEE SAYAYVAFGA VLSEAFGDLK
SAESFGQLGL ALNEKLGDIE YRCRVIAAYG VLTHHFNNHW NTTGDFFKKG IEAGYLSGDL
FYLAYCATNC TVWQPSLDLP SSLADQKKYF KVVLDTDYTD AIDSANMNMQ LTKNFMGLTE
GLYVLDDAEF NEVRCLKQMT QRKYSSGIGM YHIHKAYIYL FYGQHKKSYE SVKQADQYVK
SLVSLINLTR LCIVSFFASS GYLLFGIDPP RDQLKKRMKK ELAKMKRWAA YNPTNFLHMQ
HLMEAEIANI DDDFVGATKL YEKAIRLAGE NAWQADEAFA NELAAKFFSR HGIDTASSGY
WKDAYYLYNK WGAQGKIKLL REAYPQLFKT VRSSAAERVS DLSGGEERET IYALDVDTIV
KSSQAISGEI ELKSLVIKMM NIIMMNAGAE NGMLLLKQDD RILIQASASA DEVKTMQNIP
AEDSRQLPQT IINYVSHLQE SVVLYDAANQ GKFRNDDYIL RNQTKSILCS PIVFLNKLYG
IVYLENNISV GAFTEERLKI VRLLSSQMAI SIQNAILYSN LENKVQERTV EIQAQRDQTQ
QALTELKATQ ARLIQKEKMA SLGELTAGIA HEIQNPLNFV NNFAEISSEI VDDLVLEHSK
PTRTAKLESD LLTFLKDNLT KIHHHGQRVS NIVKGMLEHS RIGSGEMQPT NLGALADEYL
YLAYNGLKSK DKTFSCELVT YYDPAVYTVN VVSQDISRVF LNLFSNAFYA VRERKQQQGD
AYQPFVRVHV RQSKGFVEIL IADNGIGMSQ AVQEKIFQPF FTTKPTGEGT GLGLSLSYDI
ITKGHRGGLF VQSWEGEGTE FTIQLPVSEE NVVA