| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3274 |
|---|
| Symbol | |
|---|
| ID | 8727027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3956457 |
|---|
| End bp | 3958031 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003388084 |
|---|
| Protein GI | 284038154 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.847415 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACC TTCTTCCTGC TTTTCTGCTG GCGGCTTCGT CTGCATTGGC CCAGCAAGCA
CCATCGGGTC GTACCGTAGC CCATGTCGCA ACCTATCAGC CGCCCACGTT TACGGATACC
GACCGGCTCA AAAAGCTGGA ACCGGCTTTC CCCATCGTCG AAAAACTTTT CCGCGATATT
GCCGAAAAAC GGCACATTCC GGGAATGGCT TACGGCATTG TGCTCGATGG CAAACTGGTT
TATTCGGGTG GGGTGGGCTA TGCCAATGTC GATAAAAAGA TAGCCGCAAC GCCTAAATCC
CTGTTTCGGA TTGCCTCGAT GACCAAAAGC CTGACCTCGA TGGCGGTACT AAAACTCCGC
GACGAAGGTA AACTCCGGCT CGACGACCCC GCCGAAACCT ACATTCCAGA ACTGAAGTCG
CACAAGTACC TCACCGCCGA CGCCCCCAAA ATTCTGGTCC GTAACCTGCT CACTCACTCG
GCCGGTTTTC CCGAAGACAA CCCCTGGGGC GACCGTCAGC TGGCTGACTC TGACGATGAC
CTGACGAAGC TCATCAAAGG CGGTATCTCG AACGCCAACG TACCGGCTTT CGCCTACGAA
TACAGTAACC TCGCCTTCGC CATGCTGGGC CGGATTATCA GCACTGTATC GGGCAAACCC
TACCAGCAAT ACATCACCGA AACCATCCTG AAACCGCTGG GCATGAACGA CACCCAATGG
GAGTACGCCA ACGTCCCGGC CGACAAACTC GCGCTGGGGT ATCGCTGGCA GGAAGATGGA
TCGGGAACGG GCAAGTGGCT CGAAGAACCC CTGCTACACG ACGGCTCCCA CGGCGCGATG
GGTGGCCTGA TTACATCCAT CGAAGATTTC AGCAAATACG TAGCCATTCA CGAAGCCGCC
TGGCCACCCC GCAATGATGT CGATAATGGG CCGATAAAAC GAAGCTCGAT CCGGGAAATG
CAGCAGCCCT GGACATTTTC GGGTCTGGCT GCTCAGGCAA AAAACTCGGC GGGACAGGTG
TGCCCCGTAA CAAGTGGCTA TGGCTACGGG CTGGGGTGGA ATAAGAACTG TGCCGGTCTG
GTGGGCGTTG GCCACAGTGG CGGGTTACCC GGTTTCGGTA GTCAGTGGCG CATTCTGCCG
GAGTATGGCA TTGGGGTTAT TTCGTACGGC AACGTAACTT ATGCCGGATT GGGAGGTGTC
AACATCGCCG TGCTCGACAC GCTGGTTGCG CTGGCTAAAC TACAGCCCCG CCAGTTGCCC
GTTTCGCCTA TTCTGGCCCA GCGCAAAGCC GAACTGCTAA AGCTCCTGCC CGACTGGACA
AACGCGGAAC GGAGCGGTAT TTTTGCGGAG AATTTCTTCC CGGATAAGTC GGTCGCCATC
CGCCGGAAAA CCGTACAGGA TCTATACGCC AAAGCCGGTA CAATAAAGCG CGTTGGCGAG
CTGATTCCGG AAAATCAGTT ACGCGGGCAT TTTGTGATGG AGGGCGAAAA AGCCAGCATC
GACGTATTTT TTACCCTAAC CCCCGAAAAC CCCGCCCTGA TTCAGCAACT GGACTTCCGC
GAGGTGAACA ACTAG
|
|---|
| Protein sequence | MKYLLPAFLL AASSALAQQA PSGRTVAHVA TYQPPTFTDT DRLKKLEPAF PIVEKLFRDI
AEKRHIPGMA YGIVLDGKLV YSGGVGYANV DKKIAATPKS LFRIASMTKS LTSMAVLKLR
DEGKLRLDDP AETYIPELKS HKYLTADAPK ILVRNLLTHS AGFPEDNPWG DRQLADSDDD
LTKLIKGGIS NANVPAFAYE YSNLAFAMLG RIISTVSGKP YQQYITETIL KPLGMNDTQW
EYANVPADKL ALGYRWQEDG SGTGKWLEEP LLHDGSHGAM GGLITSIEDF SKYVAIHEAA
WPPRNDVDNG PIKRSSIREM QQPWTFSGLA AQAKNSAGQV CPVTSGYGYG LGWNKNCAGL
VGVGHSGGLP GFGSQWRILP EYGIGVISYG NVTYAGLGGV NIAVLDTLVA LAKLQPRQLP
VSPILAQRKA ELLKLLPDWT NAERSGIFAE NFFPDKSVAI RRKTVQDLYA KAGTIKRVGE
LIPENQLRGH FVMEGEKASI DVFFTLTPEN PALIQQLDFR EVNN
|
|---|
| |