Gene Slin_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3255 
Symbol 
ID8727008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3937428 
End bp3937979 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content45% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003388065 
Protein GI284038135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTAC CACACAATCT ATCCGACGCG CAGCTGCTCA GTCAGTTAAG AGCAGGAAGT 
AATCAGGGAT TTACTATGCT CTATCGACAC ATCTACCCGT CGGTAGAGCA TTTTGTCATT
CAAAACAGCG GTAGTCAGGA GGAGGCTAAA GATTTGTTTC AGGAAACGTT AGTTGTTCTG
TTAACGACAA TCCAATCTCC GGACTTCCAG CTTACATCAT CCCTAAAAAC CTATGTATTT
GGTATCAGCC GAAACTTATG GCTCAAAAAA TTAAACAAGG CTGCCCGATG GACTGGTCTG
GAAAATGCTG AAGATATTAG TATTCAGCCG GTTTCAGTTG AGTTAAAAAA CCCACCAACC
GTTTTCGAAC AGGTAACGGC AATTTTGGCA AAGCTTACCC TCCGCTGCCA GACGTTGTTA
TTGACCATCT TTTTCCAGAA ACGATCAATT ACCGACATCG TACAGGACGA AGGCTACGCG
AGTGTTCATT CGGCTCAGAA CCAGAAGTAC AAATGTCTTC AGCAAGCTCG AAGAACAGCC
CGCTCTACGT AA
 
Protein sequence
MPLPHNLSDA QLLSQLRAGS NQGFTMLYRH IYPSVEHFVI QNSGSQEEAK DLFQETLVVL 
LTTIQSPDFQ LTSSLKTYVF GISRNLWLKK LNKAARWTGL ENAEDISIQP VSVELKNPPT
VFEQVTAILA KLTLRCQTLL LTIFFQKRSI TDIVQDEGYA SVHSAQNQKY KCLQQARRTA
RST