Gene Slin_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3240 
Symbol 
ID8726993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3924151 
End bp3924540 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388050 
Protein GI284038120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.506413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAAC GCATCCTCCT GTTCAGTATC GCCTTTTTCG GCTGGCACTT TTCTCTGGCT 
CAGATCCCTC AACGTGCTCA AACGTCGTCG GACAGCATTA TGATCACGAT CTTCCTGAAG
CATCAGCAGG ATAAAAGCCT GAAGCAGATT CAGGAAATTC AGAATCAGAA CAAGTTTCTG
GAAATGTTTC CGCCCAAAGA AGCCCGAGTA ATTTCATGGT ACGTCATGAT GGGCATCGGG
CAGGTGGTCA CTGTCCGAAT CCCTGCCAAA GATCTGAGAA CCCTCAACCT GACCATCGAG
AATGGCGCCT GGGGTGCCTA CACCACCGAG TTTTATCCCA CTTATGACTT CGTACCGGTC
TGGCAAAACG CCATTAAAAA TAAGAAGTGA
 
Protein sequence
MVKRILLFSI AFFGWHFSLA QIPQRAQTSS DSIMITIFLK HQQDKSLKQI QEIQNQNKFL 
EMFPPKEARV ISWYVMMGIG QVVTVRIPAK DLRTLNLTIE NGAWGAYTTE FYPTYDFVPV
WQNAIKNKK