Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3238 |
Symbol | |
ID | 8726991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3922554 |
End bp | 3923009 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | endoribonuclease L-PSP |
Protein accession | YP_003388048 |
Protein GI | 284038118 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.635376 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGTT TGCTCCTTTG CCTACTGGCG GTCAGTGTAA GTTTTTCGGT ATCCGGTCAG CACAAGCAGA TCGTAAAAGC GCGGGTTGCG CCCGCAACGC CCTATCCCTT TAGTCCGGGG GTAATTAGTA ACGGATTTTT GTTTGTATCG GGCCAAGTGG GAAATGACCC GCAAACCGGT AAACTGGTCG AGGGCGGTAT CGAAGCGGAA ACCGTTCAAA CCATCAAGAA TATCAAAACC ATTCTGGAGG ATGCCGGGGC GTCTCTCGAT GATGTGGTCA ACGTGACAGT TTATCTGAGC AATATGGACG ACTTTCCGAA GATGAATGCT ATTTATAAGC AGTATTTTAA GGAAGGATCG TACCCTGCCC GTGCTACCAT TGGGGCGGCC AAACTGGTTT TCGGGTCTAG TGTCGAGATG ACCATGACAG CCGCCATGCC TCAGAAAAAG AAGTAA
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Protein sequence | MKCLLLCLLA VSVSFSVSGQ HKQIVKARVA PATPYPFSPG VISNGFLFVS GQVGNDPQTG KLVEGGIEAE TVQTIKNIKT ILEDAGASLD DVVNVTVYLS NMDDFPKMNA IYKQYFKEGS YPARATIGAA KLVFGSSVEM TMTAAMPQKK K
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