| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3208 |
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| Symbol | |
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| ID | 8726961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3886290 |
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| End bp | 3888761 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003388018 |
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| Protein GI | 284038088 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00709825 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.206035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCAA CTACTTTTAG GTTAACTGGG TTGTTTTTGC TTCCTGTAGT AACATTACTC
GTTGCGTTCC GAACGTATAA TGACGAGTTT ATTAAACGTT TACTCGACCA GTTTCGTCTT
TATAACCAGC AGCGGCCTAC CGAGAAAGTA TACATTCATA CTGATCGGGA AGCGTACCTT
ACCGGCGAAA CGATCTGGCT GAAAGGCTAT CTCGTCAACG GAAGTTCGCA CGAAGCCGAT
ACACTCAGCC GGGTGCTGTA TGTCGATCTG GTAGACCCCA TGGCCAGACG TGTTCGTTTA
CGGACCCAGC TCCGGGCCAC AAACAGCTAT GCGCCTGGCC AGCTGACGTT GCCTGATTCC
TTAGCGGCCG GAAGCTATCA ACTCCGCGCC TACACCAGTT TCATGCGGAA TTACCCGGAG
GCTTACTTTT TCACCAAGAC GCTAACGATT CTTCGTCCCG ACACGGGTGC CGAAAAGAAT
ACGGGTGCTC AAGCCAGCAA TCGTCCTGAT ATACAGTTTC TCCCCGAAGG CGGGCAGTTA
CTTATGGGTT TGGGAGGCCG GGTGGCGTTT AAAGCCGTCA ATTCGTCGGG GATGGGGGTA
GACGTAAAAG GCTTTGTGCT GGATACCCGC AAGGATACCG TTACCGGCTT TTCCAGTTCG
CACCTGGGTA TGGGCTTCTT TATACTTAAA CCCGAACCCG CTCAGACCTA CACGGCTTAT
GTGCCACTTC CTGATGGAAC GTTAGCTGCT TATCCACTCC CTGCGGTTCA GCAGGAGGGT
GTAGGTATGC AGGTCGAAAA TCTGACGAAT AAAGACAATG TGCTGGTGTA TGTCATGCAC
AATAAAACCG GCATTGATAC GACTGCCCGA ATAACGCTGG TGGCGCAGAC AAGAGGGCAG
ATTTATCAGA CGGCCCGGAT TCCATTTGTC AAAAAGCTGG CTATGGTACG CCTGCCGCGT
GCTCAGTTTC CAGAAGGTAT TACCCAACTG ACGGTCTTTG ACGAAACCAA TAAGCCCGTT
TGTGAGCGAC TGATATTTAT TCATCGGGCC GAACAGATCA ACGTCTCTCT GGTGGCGGAT
AAACCAGCCT ATCGGAATCG TGAGCAGGTT AATCTGACCG TGACGACGAC CGACGCAAAC
GGCAAACCAC AAGCTGCTAA TCTGTCGTTG GCTGTTGTCG ATGCGCAACT CGCGCCCGAA
GTAGACGCTA ACGGGTCCAC CATCCGGTCA CATCTGCTGC TGGCGTCTGA TATAGCTGGT
ACGATCGAAC AACCCGATTA TTATTTCAAA TCTGCCAATC CGGACCGGTG GCTGAAGCTG
GATATACTGA TGATGACCCA GGGCTGGCGA CGATTTGCCT GGGTCGATGT GCTGTCGGGA
ACCATACCAC CAAACAAATA TCCACTGGAA GGGGGCTTGT CGCTAACAGG ACGGGTTATC
CGGCCTAATC AGAAAGATAT TGGCGGAAAA GTTAAGCTTA CGTTTATGCT GGCTAAACGG
GACAGTACAC GTGATATCCT GATTGGTGAT ACCGATGAAG CCGGCAATTA TGCCGCTTAT
GACCTTGATT TCACGGATAC CACAACCGTC ATGATCCAGG GCCTGAAAGG GAGTGCAAAC
CGAAATCTGG TTATCACCCT CGATCAGCTT CTTGTCCCAC CGGTAACCAT CCTCAAAGTA
CCGTACAACC CACTCGAATT TAGGCGTGAT GAACTGGCCG ACTTTATCCG GCGAACCAAA
GAATATCAGG AAATTGAGCG GCAGATCCGG CGCAACGGCG AAGTATTGTT AAATGCGGTG
ACTGTAAAAG CGAAAAAGTA TAAGGAGCAG GATTCGAGAG TTATTTATGG TACGCCGGAT
GCCAGTGTCA AATTCGATCA AGTCAATACC TCCGGGCGGT TAACGTTTCT GGATGTTATT
CAGGGGCAAA TTGCGGGTGT GCAGGTAACC GGCAACGGGT TGAGCGCCCG GGTGCAAATT
CGGGGTGCCG CCAATTTTAA TGGGCCGGTT GAACCGTTGT TCGTACTTGA CGGTATGCCG
ATGGACTTGC AGGGGGTTAT GGGCGTATCG GTGCAGGACA TTGACCGGGT GGATGTCCTG
AAAGGCGCTT CGGCGGCTAT CTATGGATCG CGGGCTGGAG GTGGCGTTAT TTCAATCCTC
ACCAAACGAG GTAAGCCGGA TTATGATTTC TCGAAAGATG TAACGCCGGG GATGCTCATT
GCCAAACTAC CCGGCTATGC ACCCCGGAGA GAGTTTTACG CTCCCCGTTA TGACGTTAAA
AAGCCTGAGC ATGCTCGCCC GGATTATCGA ACAACGCTGT TCTGGACACC CATGATCCAG
ACTGATCAAG ACGGGAAAGC CACCGTTTCA TTCTTTACAT CTGATGCTAA AACCAATCTT
CGGATTCGGG CAGAAGGCCT TACCCGATCA GGAATGCCGG GCGTAGGCGA TGCGCGAGTA
CGGGTCGAGT AA
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| Protein sequence | MRSTTFRLTG LFLLPVVTLL VAFRTYNDEF IKRLLDQFRL YNQQRPTEKV YIHTDREAYL
TGETIWLKGY LVNGSSHEAD TLSRVLYVDL VDPMARRVRL RTQLRATNSY APGQLTLPDS
LAAGSYQLRA YTSFMRNYPE AYFFTKTLTI LRPDTGAEKN TGAQASNRPD IQFLPEGGQL
LMGLGGRVAF KAVNSSGMGV DVKGFVLDTR KDTVTGFSSS HLGMGFFILK PEPAQTYTAY
VPLPDGTLAA YPLPAVQQEG VGMQVENLTN KDNVLVYVMH NKTGIDTTAR ITLVAQTRGQ
IYQTARIPFV KKLAMVRLPR AQFPEGITQL TVFDETNKPV CERLIFIHRA EQINVSLVAD
KPAYRNREQV NLTVTTTDAN GKPQAANLSL AVVDAQLAPE VDANGSTIRS HLLLASDIAG
TIEQPDYYFK SANPDRWLKL DILMMTQGWR RFAWVDVLSG TIPPNKYPLE GGLSLTGRVI
RPNQKDIGGK VKLTFMLAKR DSTRDILIGD TDEAGNYAAY DLDFTDTTTV MIQGLKGSAN
RNLVITLDQL LVPPVTILKV PYNPLEFRRD ELADFIRRTK EYQEIERQIR RNGEVLLNAV
TVKAKKYKEQ DSRVIYGTPD ASVKFDQVNT SGRLTFLDVI QGQIAGVQVT GNGLSARVQI
RGAANFNGPV EPLFVLDGMP MDLQGVMGVS VQDIDRVDVL KGASAAIYGS RAGGGVISIL
TKRGKPDYDF SKDVTPGMLI AKLPGYAPRR EFYAPRYDVK KPEHARPDYR TTLFWTPMIQ
TDQDGKATVS FFTSDAKTNL RIRAEGLTRS GMPGVGDARV RVE
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