| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3200 |
|---|
| Symbol | |
|---|
| ID | 8726953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3876169 |
|---|
| End bp | 3877092 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003388010 |
|---|
| Protein GI | 284038080 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00274431 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.134727 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGTT TATCCATAGT TCTTTTATCA CTACTAACAA CATTAAGCTT TGCTCAGGCA
CCTTTAACCG GTTTGATTGC TTACTATCCG TTTACCAATA ACGCCAATGA TGCAAGTGGT
ACAAATAATA ATGGAGTTGT TTATGGCGCC ACGCCAGTAG ATGGCCAGAA TGGACTGGCA
AATAGTGCCT ATCGTTTTGC GGATGGTAAT AAGATTATTG TTGCCAATAA CACTTCATTG
AAGATCACGA ATGAATTCTC GTTTAGTGCA TGGGTTCGAT TAAGGTCTTT CGCCGGACGC
AATAACACCG ATGGGTCATT ATCATCGTAC GGAACCCACG CCATTTTCGC TAAAGATTGC
GATCAGGGTT GGTTTTCCTG TACGTTAATA ACAGATAGTA AGACGCCAAA CACGGTAATT
CTTTCCAGTG GCAACTGGCT GGGTGGATGG CAGTATTATT ACTTTACGTA TACGGTCGGA
AACTGGGTAC ACGTGGCCAT TGTGAACAAG AACAATAGGC TGGAGCAGTA TATAAATGGC
AAAATGGTGA GTGCTTCTTT TTCGAACATC GACTTTACAC AGGTCAACTC GGCTAATCTT
TATATTGGTG GTATGGCATG CTGGCCCTAT TTTTTCAATG GCGACCTGGA TGAAATGCGT
TTTTATAACC GTGGAATAAC CGAGTCGGAA GTGGCAGCTA TGTACGAGTT TGAGAAAAAG
CCCATCTTCT CCATAAACCA TGGCAACTGG AATGACACCA GTGTCTGGTC ATGCAACTGT
GTTCCCACAT CTACAGACGT CGTTCAGGTG AGTCATTCCA TTTCGGTTCC CGCCAAAACG
GCAGCCTATG CCTGGAACGT TCAATATAAT TTAAATGGTC AGGTGGCACT TGAATCTGAC
GCCCGCCTTA TACTGAGCAA GTAA
|
|---|
| Protein sequence | MIRLSIVLLS LLTTLSFAQA PLTGLIAYYP FTNNANDASG TNNNGVVYGA TPVDGQNGLA
NSAYRFADGN KIIVANNTSL KITNEFSFSA WVRLRSFAGR NNTDGSLSSY GTHAIFAKDC
DQGWFSCTLI TDSKTPNTVI LSSGNWLGGW QYYYFTYTVG NWVHVAIVNK NNRLEQYING
KMVSASFSNI DFTQVNSANL YIGGMACWPY FFNGDLDEMR FYNRGITESE VAAMYEFEKK
PIFSINHGNW NDTSVWSCNC VPTSTDVVQV SHSISVPAKT AAYAWNVQYN LNGQVALESD
ARLILSK
|
|---|
| |